Oncorhynchus kisutch (coho salmon): 109869219
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Entry
109869219 CDS
T09179
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109869219
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109869219
04261 Adrenergic signaling in cardiomyocytes
109869219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109869219
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109869219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109869219
NCBI-ProteinID:
XP_031691354
LinkDB
All DBs
Position
LG1:complement(46298339..46361349)
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AA seq
1026 aa
AA seq
DB search
MQELLALGGREAGSCIMVELVCLCFPSVSLPLSPLLPYLSLFSLLQRLVEAAEEAHLQHE
EDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYNK
DPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDC
RNRKWYIQAATSPKDMVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEM
HYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSVC
SQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQI
STLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVAM
PVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLRP
LYQEGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKMH
NDYFYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDEH
HEHRSLSQIQAIKLYLTGRKPHIKCDRELVQEVLFDAVVTAPLEAYWTGLALNKSENSDK
GVEIAYLGTRTGLSRTSLFVVPEHLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTF
VYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQCAALDG
KCTISCDNEDIKCYLIDNNGFILVTEDYSQTGLFFGEVESAVMNKLLLMGSFKRITLYDY
QALCRVYAGSSDSARSLSHPFSIVKWLLTKLVIFLLEFNLYSWWHVDLSVKAQRSRGKTM
MVPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSSNLFMVVVDNKCDCSSAPLV
SMDPIEIMYNESLKCDRLKFQKDRKRPETCHPFHPEENAMECGGTAGLSAPLTAALLPLL
ATLISR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcctcgccctcggggggagagaggctgggagctgcatcatggttgagctg
gtgtgcttatgcttcccttcagtgtccctccccttatctccactcctcccctatctctcc
cttttctccctccttcagcggctggtggaggcagcagaggaggcccatctacagcacgag
gaggacccagagctgcagtatgagtactttaacgcggtgctgatcaacgaggtggatgag
gagggcaacaacgtggagctgggaggcgagttcgttctggaacccaacgaccacttcaac
aacctgtcagtcaacctcagcctcagtgtggtgcaggttcccaccaacatgtacaacaaa
gatccagccatagtgaatggggtgtactggtcagaggccttgaataaagtgtttgtggat
aactttgaaaaagatccgtccctgatatggcagtactttggcagtgccaagggcttcttt
aggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttcgactgc
aggaacaggaagtggtacatccaggcagcgacatctcctaaagacatggtgatcctggtg
gacgttagtggcagtatgaagggcctgagactgaccattgccagacagacggtctcctct
atactggacacactgggagacgacgacttcttcaacatcatcgcttacaatcaggagatg
cactatgtggagccttgtctgaacggtacactggtacgagcagacagaaataataaagct
catttccgagaacatctggacaagctgttcgccaaagggattggtctgctgggtgatgct
ctgaccgaagcgttcaccattctaaatgattttaaccagactgggcatggcagtgtgtgt
agccaggctatcatgctggtgactgacggggcaacgcagatgtacgacgatgtcttcgcc
aagttcaattggccagacagaaaggtgcgcatattcccttacctgattggccgagagtct
gcctttgctgataacatgaaatggatggcctgtgctaataaagggtatttcagtcagatc
tccacactggctgacgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgtcct
aaagtcatcgaccatgagcatgacacggtctggacggaggcctacgtggacagcactctc
tcccaggcacacaagtccagaaacaagaagggcccaagcctgatgaccactgtggccatg
cctgtgttcagcaccaagaacgagaccaagaaccagggtatactcctaggggtagtgggc
acagacattcctcttcaggaactcatgaagatcatccctaaacacctgctgggtatccac
ggttacgcctttgccatcacaaacaacggctacatcctgacccatccggacctgaggcca
ctgtaccaggagggccagaagaggaggaaacccaactacagcagtgtggacctgtcagaa
gtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagactggg
acattctccatggaggtgaagaagacagtggacaaagggaaaagactcctgaagatgcac
aatgactatttctacactgaagtcaagggaactcccttcagtgtcggagtggctttgtct
agaggccatggcaaattcttcttcagaggaaacgtctcagtggaagcagggctccttgac
ctggaacagccagatgttgcgctggcagatgaatggacgtattgcaacacagatgagcac
catgagcaccgctccctctcccagatccaggccattaaactctacctgaccggacgcaag
ccacacatcaaatgtgacagggagctggtccaggaggtgttgtttgatgctgtggtcaca
gccccactggaggcctactggaccggcctggccctcaacaaatcagagaactcagacaaa
ggagtggagattgcttacctaggcacacgcactggcctctctagaaccagcctgtttgtt
gtcccagagcacctatccaatcaagacttcctgacagcagaggataaggagggggtgttc
aacgctgaccacttccctctgtggtacaagagagcagcagagcaggttcccggcaccttt
gtttactcgatcccctttggaggaaatgagaataagagtgtggttttggccagcactgcc
atacaactgctggatgacaggaagtcgcctattgttgcctctgttgggattcagatgaag
ctggatttctttcagaggaagttctggaccgctagtagacagtgtgctgctctggatggg
aagtgcaccattagctgtgataatgaggacatcaaatgttaccttattgacaacaacgga
tttattctggtcacagaggactactctcagacggggctgttctttggagaggtggagagt
gctgttatgaacaagctgcttctcatgggctccttcaaaaggatcactctgtatgactac
caggctctctgtagagtgtatgctggcagcagtgacagcgcacgctctctatcacatccc
ttctccatcgtgaaatggctcttgaccaaacttgtcattttcctgctggagttcaacctt
tacagctggtggcatgttgatctctcagtcaaagcccaaaggtcgaggggaaagaccatg
atggtgccatgtgacacggagtaccctgcattcgtctctgagcgtaccatcaaagagacc
acgggaaacatcgactgtgaggggtgtgccagatcttttgtaattcagcagattcccagc
agtaatctcttcatggtcgtcgtggacaacaagtgtgactgcagctctgcccccctggtt
tccatggatcccatcgagattatgtacaatgagtctctgaaatgtgacaggctgaagttt
cagaaagacagaaagcggccagaaacgtgtcatccttttcaccccgaggagaatgccatg
gagtgtggaggaacagcaggcctctctgccccccttacagcagcactgctccccctactg
gccactctcattagcaggtga
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