Oncorhynchus kisutch (coho salmon): 109869243
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Entry
109869243 CDS
T09179
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109869243
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109869243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109869243
NCBI-ProteinID:
XP_020314834
Ensembl:
ENSOKIG00005012147
UniProt:
A0A8C7FGW5
LinkDB
All DBs
Position
LG24:10250010..10263813
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AA seq
713 aa
AA seq
DB search
MTVAPFSRRQWASQSLRVTAAELSIVGTRGKNNAIAERFSKYQLAAEEANLERKKAAAEP
SPQTFRSCNLSVLKKLWEQPVQSATPCATLPHTRRLLPSDPNAKHQTQAPLSPDPNTSPT
AVEDQAGPGMERRQQQRDRERQEGGAAGVPCIPSEKPDIPLNNLKMMFEKGENLQNKVSR
EPVRIGGTGGITDNMDQLLGDSGSIESMPLRDRMAMYQAAVSKTEVLSSSVSSDQLDSDL
CSKQKENVPPGSVDTGPDSEPNSRKASSTESNAGSSTGTFSASPTQKDQAQPKTSRSFCL
PARESCVSCQKTVYPLERLVANQKVYHNTCFRCSHCNTKLSLGTYASLHSHVYCKPHFCQ
LFKAKGNYDEGFGLRPHKELWETKGESGAGEESRTELTTKATSFSKDKLKKCASTGTLLI
SPAVEESPLAKVNVVMASLETRAQSSAEKDKPVETRRLKISWPPRTEGDGEGGNTGDSPT
SDGSSAGKQSRAKWPPEDDSASSDQSPEPTVRSTLCRSASLKERSRPFSLAMASHAPAPA
ASQTANPEPLERRSSFEDREPELACSPEEQGMEDQEQPNSLSPGYHTPSDDSYVDIHDSS
EDEGMEGRVARLKDHHELLEADHEQGAKNDGEEEEKLEGEEEEGAGKEGEGLPSQNCQTA
SSEIAAPPSSLETEPRSKTTSQDVGFWKGEEAVSVEEMIKRNRYYEEDEDEED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgctccgttcagtcgcagacagtgggcctcccagtccctcagagtcacagct
gcggaattgtccatagttggcaccagaggaaagaacaatgccatcgctgagcgcttctcg
aagtaccaactggctgcagaggaagccaacctggagaggaagaaagccgctgcggagccg
tcgccacagactttccgcagttgcaacctgagtgtgttgaagaagctttgggagcagcct
gtccagtcagccacaccttgtgccacgctaccccacactcgccgcttactcccctcagat
cctaacgccaagcaccagacccaggcacctctctcaccagaccccaacaccagtcccaca
gccgtagaggaccaggcaggaccaggtatggagaggagacagcagcagagagaccgagag
aggcaggagggaggagcagcaggagtgccttgcatccccagtgagaagcccgacataccc
ctcaacaacctcaagatgatgttcgagaaaggagagaaccttcagaacaaagtgtccaga
gagccggtgaggattggagggaccggaggcatcactgacaacatggatcagctacttgga
gattcagggagcatagagtccatgcccctgagggacaggatggccatgtaccaggctgct
gtgtctaaaacagaggtgttatcctcctcagtcagcagtgatcagctggactctgacctc
tgcagcaaacagaaggagaatgtacccccaggcagtgtggacacgggtccggactcagag
cccaacagtaggaaagcatcttccacagagagcaatgcaggctccagtaccggcaccttc
tctgcatccccgactcagaaggaccaagctcagcccaagacctccaggagcttctgcttg
cctgcacgggagagttgtgtgtcatgtcagaagacagtctaccctttagagcgtctggta
gccaaccaaaaggtctaccacaacacctgtttcagatgctcccactgcaacaccaaactc
agcctggggacctacgcctctctgcacagccacgtctactgcaagcctcacttctgccag
ctgttcaaggccaagggcaactacgacgagggcttcggcctgcgccctcacaaggagctg
tgggagaccaaaggagagagtggggctggggaggaatccaggacagagctgactaccaag
gccacctccttttccaaagacaagctgaagaagtgcgcctctactggcacgctgttgatc
agcccagcagtagaggagtctccactggccaaggtcaacgtggtgatggcctccctggag
acccgcgcccagagctcagcagagaaggacaagccagtggagacacgtcggctgaagatc
tcctggcccccccgcactgaaggagacggagaggggggtaacactggggacagtcccacc
tcagacgggagctccgctgggaaacaatcccgtgctaagtggcccccagaggatgactca
gcctcctccgaccagagcccagagcccaccgtacgctccaccctctgcaggagcgcctcc
ctcaaggagcgtagccgacccttctcattggccatggcctcccatgctcccgctcctgct
gccagtcagacagccaatcctgagccactggagaggagaagctcattcgaggacagggag
cctgaactggcctgtagccctgaggaacaaggcatggaggaccaggaacaaccaaacagc
ctgtcacccggctaccacacgccttctgacgacagctacgtggacatccacgacagctct
gaggacgaggggatggaggggagagtcgcacgtctgaaagaccaccacgaattactagaa
gcagaccatgaacagggagcaaagaatgacggggaggaagaggaaaagctggagggagaa
gaagaagagggagcaggaaaagagggggaagggttaccttctcaaaactgccagactgcc
tcgtcagagattgccgcgccaccctcgtctctggagactgagccgaggtccaagaccacg
tctcaggatgtgggcttctggaagggcgaggaggctgtgtctgtagaggagatgattaag
aggaaccgctactatgaggaagatgaggacgaggaggactga
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