Oncorhynchus kisutch (coho salmon): 109869304
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Entry
109869304 CDS
T09179
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109869304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109869304
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
L1 family
109869304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
Ig_6
V-set_CD47
Bravo_FIGEY
Motif
Other DBs
NCBI-GeneID:
109869304
NCBI-ProteinID:
XP_031660140
Ensembl:
ENSOKIG00005046330
LinkDB
All DBs
Position
LG24:complement(16329091..16361381)
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AA seq
1121 aa
AA seq
DB search
MRALVRSTLLLLLWQRLTAIDVPLEIRQPPTIIKQSLKEHVVDPRNNMVVECEAKGTPHP
IFSWMRNGKYFNVAKDPQASMRRRSGTLDIYAWTDPGAYEGEYQCVATNEYGTAYSNKIN
LHISKATLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPEIYWMSKCSSGRPFNWPHQPHP
PVMLPIKQDRRVSMGVNGDLYFSHVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTMR
MVSEAAPTFLSPAGRSSSQTVLQGEELLLECIAAGVPTPVITWTKDGDELDTTNIKVKNY
NKLLQIPKASFEDAGEYTCTATNTIGYLEHTIAVQIKAAPFWLEKPGNLVLAPEENARLV
CRSDGIPRPSIRWFINGDSIEDATLVPNRQVSGDTITFQSVTVANTGVYQCNASNQYGYL
FANAYISVLNAIPRILRPKTALVKVIEGSCAWLDCLYFGSPVPDLRWSKYGLGNLEGNRF
KVHSNGTLQIRGTCMDDQGTYLCIVSNAAGQDENRVKLEVKESTKILKWPDNMRVLRGTD
VRLECKAEHDPTVTVTTTWMKNKQFLIIGWRLSLDDSTLVITNVNRRDEGNYTCIIKTEI
DKTSISARLVVMDRPDPPTNLKLSHSFERSVRLSWTPGDSNHSPIKEYLVQYDDDDWLPY
NWRNLSTYPGNLNSVILQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDTIPKN
IKGVSTWRNNMEISWEALNNRDWNGPHLKYLVWWKRRDSREEWKNATTWWCKYYIYDADT
FTPYEIKVQAVNDFGLGPESRVIIGYSGEDRPTAAPVKLRVSRIEATKVTVHWDPVARSS
IMGELKEYKVYFWRDSSQLRWLSVSRAMKSKAFPASGPRLSGVLPGLIPYSNYKMYIVVA
NNRYEGHSSNTIEFSTPEGTPSAPRFFRIQQRHLDTIWVDWDTPAEPNGIITGYILKYQT
VNTTREEELRVEEFPANTTSFTVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAN
AREQVDLSTQGWVIGVMCAAALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDNDQE
GSFDYRSLERISCVTTIPYSAQREDESKVRRGQTTVDTMMK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgctggtcagatcaactctattactgctgttatggcaacggctgactgccatc
gatgtcccactggaaatcagacagccccccaccattataaaacagtcgctgaaggaacat
gtcgtggatcctagaaacaacatggtggtggagtgtgaagccaaaggcaccccccaccca
attttctcatggatgcgtaatgggaagtacttcaacgtggcaaaggaccctcaggcctca
atgaggagacgttcggggacgctggacatctatgcctggactgacccaggggcctatgag
ggggagtaccagtgtgttgccaccaacgagtatggcactgcatactcaaacaagatcaac
ctacacatctctaaggccactctgtggcccagagaggtgttggagcctgtaacagtaagt
gttggtctccctctggtcctggactgcagccctcctccaggtcctcccaaacctgagatc
tactggatgagcaagtgttcctctggtagacctttcaactggcctcaccagccccacccc
ccagtcatgctgcctatcaaacaggaccgtagagtgtctatgggggtgaatggagatctc
tacttctctcatgtctatgtcaatgactctgccaccgactactgctgcaatgcacgcttc
ccctacaaaaacattatccagcagaagatgcctattaccgtcagagtccttacaatgcgc
atggtgtctgaggccgcccccaccttcttgtctccagccggaaggtccagctcccaaact
gtcctgcagggggaggagctgctcctcgagtgcatcgctgctggagttccaacccctgtc
atcacatggaccaaagatggagatgaactggacacaaccaacattaaggtgaagaactac
aacaagttgttgcagatccccaaggcctcgtttgaggacgctggtgaatacacctgcaca
gctactaacacaattggatacctggaacacaccatcgctgtccagatcaaagcggctcca
ttctggttggagaaacccggtaacctggttctggccccagaggagaatgcacgtttagtg
tgccgctctgacggcatccctcggcccagtatccgctggtttatcaacggagattcaatc
gaagatgccactctggttccaaacaggcaggtgtcaggtgatacaattaccttccagtca
gtcactgtagcgaacacgggtgtttaccaatgcaatgcttccaaccagtatggttacctg
tttgccaatgcctacatcagtgtactgaatgcaataccacgtatcctcaggcccaagact
gccctggtgaaggtcattgagggcagctgcgcctggctagactgcctctattttggctcg
cccgtgcccgatctgcgctggtctaagtatggacttggaaatctagagggaaatcgcttt
aaagtacacagcaacgggaccctgcagatcagaggcacctgtatggacgaccaggggaca
tacctgtgtattgtcagcaacgccgccggacaagacgaaaaccgggtcaaattagaggtc
aaagagtccaccaaaatcctcaaatggccagacaatatgagagtcctccgagggactgat
gtccggttggagtgtaaggccgaacatgaccccacagtcaccgtcaccacaacctggatg
aagaacaaacagttcctcatcataggctggaggctgtcactggatgattcaacgctggtc
attacaaacgtcaacagacgagacgaaggcaactacacctgcatcatcaagactgagata
gacaagacctctatctccgcccgcctggtggtgatggatcgtccagaccctcctacaaac
ttgaagttgtctcactcctttgagcgcagtgtcaggctttcctggacccctggagatagc
aatcacagccctatcaaagaataccttgtgcagtatgatgatgacgactggttaccttac
aactggagaaacctttccacataccctggaaacctcaactctgtcattctgcaactgtca
ccattcattatctatgagtttagggtcattgctatcaatgatattggaatgagtaaaccc
agtcgctcgtccgccaacttccagactggtggagcgcccccagacactatccctaaaaat
atcaaaggagtgagcacatggagaaacaacatggagatcagctgggaggcactgaacaac
agagattggaatgggccccacctaaagtacttggtgtggtggaaacggagggattccagg
gaggagtggaagaacgctaccacttggtggtgtaaatactacatttacgacgcagacacc
ttcacaccatacgagataaaggtccaagctgtcaatgactttgggctgggcccagagtcc
cgagtcatcataggctactctggagaagaccgtcccactgctgcccctgtcaaactgcgt
gtgtccaggatagaggccaccaaggtcaccgttcactgggaccctgtggctcgcagcagc
atcatgggtgaactgaaggagtacaaggtgtacttctggcgagacagtagccagctgagg
tggctgagtgtgagcagggccatgaagtctaaagcctttccagccagcgggccgcgtctc
tctggtgtcctgccgggactcatcccttacagcaactacaaaatgtacatagtggtggcc
aacaaccgatacgagggacactccagtaacaccatagagttctccactccagagggaaca
ccctctgctccaagattcttcagaatccagcagagacatttggacactatctgggtggac
tgggacactccagcagagcctaatggcatcatcaccggatacatactgaaatatcagaca
gtgaacacaacccgggaggaggaactgcgtgttgaggaatttcccgcaaacaccaccagt
tttacagtgcgccgatatgatcgctacacccgctatagattcaccatagcagcacagact
agaattggggtaggagagtggtacacagaggaatcaccccattatacaactgaagcaaat
gcacgggagcaggtggacctctccactcagggctgggtcattggtgtgatgtgtgctgcg
gccctcttcgtgctcatcctgctggtcgtctgctttatcaagaggagccgaggggggaaa
tacccagtacgggacaagaaagaagtgacattggagccagtggatgataacgatcaggag
ggatcatttgactatcggtctctggaaaggataagctgtgtcaccaccattccctactct
gcccaacgggaggatgagagtaaagtcaggaggggtcagacgacagtcgacaccatgatg
aaatga
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