Oncorhynchus kisutch (coho salmon): 109869360
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Entry
109869360 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X3
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109869360
03036 Chromosome and associated proteins [BR:
oki03036
]
109869360
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109869360
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109869360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
Beta-prop_Vps41
IQ_SEC7_PH
CFAP43_N
DUF7675
Beta-prop_EML_2
DUF6059
Motif
Other DBs
NCBI-GeneID:
109869360
NCBI-ProteinID:
XP_020315036
Ensembl:
ENSOKIG00005040521
LinkDB
All DBs
Position
LG24:complement(21994882..22031599)
Genome browser
AA seq
1335 aa
AA seq
DB search
MASSPPPTSVPMSNMASKMEEEEEGMKFDFDNSDEECSTTPANSVSTMAKGFEATVMAGL
ASKRNTMGPSSAQDPTVKPRLNGWPSAGKEDQSMHSLPHSNSSEMAGRRSPEGRSELGLS
GDTEGSGRRNSIYEAGSMNECYYTPILKADHIDTQTGKPPPILDVGGPGDAASPENENVS
SPEGLQSPDGLACTDSPPSPTSPDNVMTDPTLRHDMTNSTSPDDIIMTSPEAIFRSSRPE
VIYDDVPCESLLSPLEDDIYEDVQRPESHHGTNNGWSDSEFESYDEQSDSETKIPTVARS
SSKVQMLMKAARNGTKDGLEKTKLAMMRKVSFLQKKETTEESDDDAGYLDVMVSEVKHPP
PQLSPMPKGLSTQQIIRRHIVGSIVQSERSYVDSLKRILVEYQKPLLEPEARILSDKKVR
PIFYRLREILQCHSMFQIALASRVAEWDLSEKIGDLFVASFSKSMVLDVYSDYVNNFTNA
MALIKKACISKPAFLEFLKKKQVSSPDRITLYGLMVKPIQRFPQFILLLQDMLKNTPRAH
PDRLPLQLALTELETLAERLNEQKRVADQVAEIQQLARSIGDRQLSKLLNSDQRQLILCE
VLIETVYGEKGQVLKSKERKVFLLNDTLICANVNVKGPPDISSLVPIGPKYTVKWSAPLL
QTQVVEVGQESFQSKDTGKRPNVANVPGKVFLGPPRLYQELEELQHDLYVVESITLLVGT
LQGTYQNLNTTVGQDWCLALQRLIHIKDEQIQCANKCRLRLAVPGKPDKSGRPVSFMVVF
NTPSPLSKISWVNRLHLAKIAKREENTPGWVFAEDDGKTRHPFWCPLLACRLPIFSSKTQ
DQKLETALHNPVQCALLAFSAASTSLPQGYLWVASGGDRNHGQVEIFSLNRSMPRMVKSI
QMGAPVLCLDHVMEPCPTEEEGEAEAAVTSTARTGNTICVGLQDGNIHVYGTVDTSTQCL
LTFSNPDSCPVLCLKHSASFLFAGLGNGKVSVYARKSGEGLWDPESCRLVTVGSGPIRTL
LTLENAVWASCANHVTVIQGSSLHTQSFDAHPEPLVSVSHMVRAGGGVWMAFSEGSSIRL
FHTETLEHLQEINISTRSTFLSPGQQGSVRVTSLLICQGLLWVGTAQGIIVTLPVPKLEG
IPKITGKGMTSLNAHCGPVDFLVVTSSTLSPDMLKRDSVCETADQANGGAGGGEGGERRN
ELSQESLSQPDCSSPQGEPTKAKGMLLQYRLRSTTQLPGKLLTAEPDQSPCDAPPETPEH
SPEDGSIYELSEDPEVWVRGQPPAREGRGKDKVTSAAVFSGGRGFRRLGEETIAANGDPD
ESTLMVWQLPLTVSP
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaccccctccaacctcagtgcctatgtccaacatggcctctaagatggag
gaggaagaggaaggtatgaagtttgactttgacaacagtgacgaagagtgcagtacgaca
ccagcgaactctgtctctaccatggccaagggctttgaagccactgtgatggcggggctt
gcatcaaaaaggaacacaatgggccctagttctgcccaagacccaacagtaaagccaagg
ctcaatggatggccgtctgctggaaaggaggaccagagcatgcactcactccctcattcc
aatagctcagagatggctggaagaaggtctcctgagggccgctctgagctgggactgtca
ggagacacagagggctctgggagaagaaatagcatttatgaagcaggatctatgaatgag
tgctactacacccctatcttaaaggctgaccacatagacactcagacagggaaacctccc
cctattcttgatgtaggaggtccaggtgatgcagcaagtcctgaaaatgaaaatgtgtct
agtccagagggcctgcaaagtccagatggtctggcctgcacagacagcccacccagcccc
accagtcccgataacgtcatgactgatccaaccctccgccatgacatgaccaactcgacc
agccctgatgacatcatcatgactagtccagaggccatctttaggtccagtcgtccagag
gtcatctatgatgacgtgccctgtgagagccttctctctcctctggaagatgacatctac
gaggacgtccagaggccagaaagccatcatggcaccaacaacggctggagcgacagtgag
tttgagagttatgatgagcagtcagacagcgagaccaaaatacccactgttgcccgaagc
agtagtaaggtccagatgctgatgaaagcagcgagaaatggcaccaaggacggactggaa
aagacaaagttagctatgatgcgtaaagtctctttcctgcagaaaaaagaaaccacggag
gagagtgatgatgacgctggttatctggacgtgatggtgtctgaagtgaagcacccaccg
ccccagctgagccctatgccaaaggggcttagcacccaacagattatcagacgccacatc
gttggttccattgtacaaagtgagaggagttatgtggactctctcaagagaatcttagtg
gagtaccagaagcccttgcttgagccagaggcccggatcctgagcgataagaaggtgcgg
cccatattttaccggctgcgggagatcctgcagtgccactcaatgttccaaatcgccctg
gcatcccgtgtggccgagtgggacctcagtgagaagatcggagacctctttgtggcctcg
ttttccaagtcaatggtactagatgtgtacagcgactacgtcaacaacttcactaacgct
atggcgctcatcaagaaagcctgcatttccaagccagctttcctggagtttctcaagaag
aagcaagtgtcaagtcctgacagaatcacgctttatggccttatggttaaaccaatccag
cgcttccctcagttcatcctgctgctacaggacatgctgaagaacactccccgggcccac
cctgaccgcctgcccctgcagttggccctcactgagctggagacgttggccgagaggctg
aacgagcagaaacgagtcgctgaccaggtcgctgaaatccagcagctggcacgcagcatt
ggtgaccgtcaactgagcaagctcttgaactcagaccagaggcagctgatactgtgtgag
gtactgattgagacagtgtacggggagaaaggacaggtccttaagtccaaggagcgcaaa
gttttcctgctgaacgacaccctcatctgtgcaaacgtcaacgtcaagggtccccctgat
atcagcagtctagttcccattggtcctaaatacacagtgaagtggagtgcccccttgctg
cagacgcaggtagtggaggtgggacaggagagcttccagagcaaagatactgggaaacgg
ccaaacgttgctaatgttccaggtaaagtgttcctgggccctcccagactgtaccaggag
ctggaggagctacaacacgacctgtatgtggttgaaagcatcaccctgctggtggggact
ttacaaggcacctaccagaacctgaacacaacagtagggcaggactggtgccttgcactg
cagaggctcatccacatcaaagatgaacagatccagtgtgccaacaagtgccgcctgcgg
ctggctgtgccaggcaagcctgacaaatctggacgaccggtcagtttcatggtggttttc
aacactcccagtcccctcagcaagatctcctgggtcaaccgcctacacctcgccaagata
gccaagagggaagagaacacgccaggctgggtgtttgcagaggatgatgggaagactaga
catccattttggtgtcccctgctagcctgccgacttcccatcttctcctccaaaacacaa
gaccaaaagctggagacggcccttcacaacccggtccaatgtgccctgctggcattctct
gcagccagcacctctctgccgcagggctacctttgggtggccagtggaggtgaccgcaac
catggtcaagtggaaatcttctctctgaaccgctccatgccgcgcatggtcaagtccatc
cagatgggggcgccagtcctgtgtctggatcacgtgatggagccttgtcccacagaggag
gaaggggaggcggaggctgctgtcacgagcacagccaggactggcaacaccatctgtgta
ggcctgcaggatggcaacattcatgtgtacggtaccgtggacacttcgacccagtgcctg
ctgaccttctccaacccagacagttgtccagttctgtgcctgaaacactctgcctccttc
ctgttcgctggcctggggaatggaaaagtgtctgtttatgctcggaagagtggagagggg
ctgtgggaccctgaatcgtgcaggctggtgactgtgggcagtggccccatccgcaccctc
ctaaccctagagaatgctgtgtgggccagctgtgccaaccacgtcaccgtcatccagggc
tccagcctccacacacagagttttgacgcgcaccctgagccactggtcagtgtgagtcac
atggtgcgggcggggggaggggtgtggatggccttctccgagggctcatccatccgcctg
ttccacacggagacactggagcacctgcaggagatcaacatctccacacgctccaccttc
ctcagcccagggcagcagggcagcgtccgggtcaccagcctactcatttgccaggggctg
ctgtgggtgggcactgcccagggcatcatcgttaccctgcccgtgcccaaactggagggt
atccccaaaataacaggtaaagggatgacgtctctaaacgctcactgtggccctgtggat
ttccttgtggtcacctccagcaccctgtccccagacatgctcaaacgggattctgtctgc
gagactgccgaccaggccaatgggggagcgggaggaggagagggtggggagcggaggaat
gaattgtcccaggagtcactctcgcaacctgactgctcctcccctcagggagagcccacc
aaggccaagggaatgctgcttcagtatcgcctccgctcaaccacccagctgcccggcaag
ctgctgacagccgaacccgaccagagcccatgtgacgccccaccggagaccccggagcac
agccctgaggacggctctatctacgagctgagcgaggaccctgaggtatgggtacggggg
cagcccccggccagggaggggcgtgggaaggacaaggtgacctcggctgccgtcttctcc
ggaggcagggggttccgtcgacttggggaggagactatagcagccaatggggacccagat
gaaagtacgctcatggtttggcaactcccactaacagtgagtccatga
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