Oncorhynchus kisutch (coho salmon): 109869382
Help
Entry
109869382 CDS
T09179
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109869382
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
General mRNP proteins
109869382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
109869382
NCBI-ProteinID:
XP_020315068
Ensembl:
ENSOKIG00005012301
UniProt:
A0A8C7FJ80
LinkDB
All DBs
Position
LG24:28912843..28924066
Genome browser
AA seq
546 aa
AA seq
DB search
MADDFDIEAMLEAPYRKDEIKSSSANGHEERSSKKKKRSHSRSSRSPSSDKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKNGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTDIQARLNPPPEAVANPAL
NLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIY
VDKNSPQGNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQL
LMPSRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgacattgaggctatgctagaggctccatacagaaaggatgagatc
aagtcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctgacaagcgcagaagcaagagcaaagacaggaag
aagagccgggacaggaagaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagcggctcccatagcagggagcgtgccgggcgctacagaggacgccgcagc
ccctttttggggccaaaatttaacggtggtccaggagggaagaatggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagccagaatcagaccacgagatctagaggacttcttctctgctgtgggg
aaagtgagagacgtgaggatgatctccgatagaaactccaggaggtcaaagggcatcgcc
tacattgagtttctggaggcgaattcggtcccattggctattggcttgactggacagaga
cttcttggagtgcccatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcggctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctca
tttgcagatgcagagtgcgctaagaaagcattggagcagttgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccaccgccagctcc
ttcctggacaacgacgagctggagaggacgggcattgacctgggcaccaccgggcgcctg
cagctcatggcccggctggcagagggtactggtcttcagattcctccagctgcacaacag
gctctacagatgagtggttccatgcactcctcttcaatccacttcggcaacatggcagct
ggtacagacatacaagccaggctgaacccaccccctgaagctgttgccaaccctgccctg
aacctgggtccaagcatgaaccaggccatgaacctcccaactcaaccactggctacacac
tgcctacagctgtccaacatgttcagcccacagtcggaaaatgagcctggttgggacatt
gagattcaagatgacgtcatggaggagtgcaacaaacatggtggaattgtccatatatat
gtcgacaagaactcacctcagggcaacgtgtacgtaaaatgccccactatcccaacagcg
atggctgcggtgaatgccctacatggacggtggtttgcaggtaaaatgatcactgcggcg
tacgtacccctcccaacctaccataaccttttccctgattcagtaacggccacccagcta
ctgatgccttcgcggcgataa
DBGET
integrated database retrieval system
