Oncorhynchus kisutch (coho salmon): 109869392
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Entry
109869392 CDS
T09179
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109869392 (trim45)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109869392 (trim45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Apolipoprotein
Snapin_Pallidin
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
109869392
NCBI-ProteinID:
XP_020315100
Ensembl:
ENSOKIG00005001674
LinkDB
All DBs
Position
LG2:complement(60299271..60304649)
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AA seq
600 aa
AA seq
DB search
MSHCDQILEKDVDSSPTATTNSSSKNGDNGDVVINARAVCRVCKCLYREPKIMQCLHTFC
ADCVRQLEPFSVSSGVHDGKAVPLEGEPPSAVTVLCPECDSEVDIPLSGVDGLTTDHLAL
DEVFLETLMSKNSVVCDLCSDGDAEKRCEVCSVNLCEFCIQAHRRQKRTLSHTVQCLEDL
KTQGCLSRPVLCSLHPAQELRLFCEPCDLPVCLECAATFHRDHRCLPTRDVIDHHGGHIR
DLVTGRLRPRLDQLEESLRKVDLSQETLQTRVDAAVDEVRSFARGYASAVESHCLLLLRR
LEELGLQRRSHLHLQRAQLQQALSDTRGGVEFAERLLTCGSDAEILSTKDVTLRRLAVLM
ETGYNPPPEAVCPDEGSSICFLPQESAGEVAGYPMVGVIHTKTLELSRCTIEGEGLQRGR
EGQRGEFTLVCRDFAGEQMGRGGEAVLVSMVHKEKKDCRVEAAVVDNNDGSYSVSYTPLE
PGPYSVWVCVKALHIKGSPFVLNVRRQVRWHRGTFHCCSFCSSGGSKEARCGCMGTMPGG
FQGCGHGHKGHPGKPHWSCCGSTVEASECLPQSVITAVGGTITAVGGTGSPRGHLRTVEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactgtgaccaaattttggaaaaagatgtggattcctcgccaaccgcgaccaca
aactcgagctctaaaaacggagataacggggacgtcgtgatcaatgcgagggcagtgtgc
cgcgtttgtaaatgtttatatcgcgagcctaaaattatgcagtgtttacacaccttctgc
gcagactgcgttcgtcaactggaaccattttcggtgtcttcgggagtacacgatggtaaa
gcggtccctctggaaggcgagccgccctctgccgtcaccgttctctgtccggagtgtgac
tccgaggtggacatcccgttgtccggagtggacgggctgaccactgaccacttggccctg
gacgaagtgtttctggagacgctgatgagcaagaactctgtggtatgcgacctgtgcagc
gacggggacgcagagaagcgttgtgaggtgtgcagtgtcaacctgtgtgagttttgtatt
caagctcacaggagacagaagaggacgttgtctcacaccgtccagtgtctggaggacctg
aagacccagggttgtctctctcggcccgtcctgtgctccctccaccctgcccaggagctg
cgtctcttctgtgagccctgtgacctacctgtctgcctggagtgtgccgccactttccac
cgcgaccaccgctgcctccccacacgtgatgtcatcgatcaccatgggggccatatccgg
gatttggttaccgggcgcctgcggccacggctggaccagctggaggagtcactgaggaag
gtggacctatcccaggagaccttgcagaccagggtggatgcggcggtggacgaggtgcgt
tccttcgcacgaggctatgctagcgctgtggagtcgcactgcctgttgctgctacggcgc
ttagaggagctgggtctgcagcgcaggagtcatctccatctgcagagggcgcagctgcag
caggccctgtcagacacccgcgggggggtggagtttgccgagcggctgctgacgtgcggg
tcggacgcagaaatcctcagtactaaggacgtgaccctccgcaggctagctgtcctgatg
gagacgggttacaacccccccccagaagccgtctgccccgatgaagggagcagtatttgc
ttcctgccacaggagagtgcaggcgaggtggcggggtacccgatggtgggggtgatccac
accaagaccctggagctcagcaggtgcaccattgaaggggaaggtctgcagcgtggcagg
gaaggccagagaggggagttcaccctggtgtgtagagactttgctggagagcagatgggt
cgtggaggggaagctgtcctggtcagtatggtccacaaggagaagaaagactgcagagtg
gaggcggcggtggtggataacaatgatggctcctattctgtctcctacacccccttggag
ccagggccctactctgtgtgggtgtgtgtcaaggccctacacattaagggttcccccttt
gtcctgaatgtgaggagacaggtccggtggcaccgtggaacattccactgctgttccttc
tgctccagtgggggttctaaagaggcccgttgtggctgcatgggaaccatgccaggaggg
ttccagggctgtggtcacggccataagggtcaccccggtaagccccactggtcgtgctgt
ggaagtacggtggaggcctcagagtgcctgccacagagtgtcataacggcagtgggtgga
acaataacagcagtgggggggacaggctcgcctcggggccacctcaggacagtggagctc
tga
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