Oncorhynchus kisutch (coho salmon): 109869407
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Entry
109869407 CDS
T09179
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109869407 (ttf2)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109869407 (ttf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
109869407
NCBI-ProteinID:
XP_020315123
Ensembl:
ENSOKIG00005001696
LinkDB
All DBs
Position
LG2:complement(60337684..60347461)
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AA seq
1190 aa
AA seq
DB search
MEIVLCNTHGSTCMLKTGVKEGPNKGKSFYLCGERQQGSPCDFTKVAGIPASHCLLHEDS
MVELQTLIRSQQQQGYRLYYRCVLGKNAGQRWCGNVPWTAPEAEKRSPLSDRQLQPSSLP
PERNPFKAPGKTDQMSEWRRLQDGGRLEDESNGKNEKGGEKERLHKSVGKESEHGRGMEE
EERGMSSPSESWRDTQLPAGMKIKKRVSGEENKESSETSPEEKEKTVKEMKDKNKNSNKD
SQREAEKSNNSSPKPQNTEDPHKASKGRQGYYQREPPTNSLKESGKHAGKKPSTDRKKSN
PSDPNGTTSKDAQAPKSTEKTKTPIPQSDKPAQRLSTPTTEQDKEAEKIAASSSQQNQDK
SHCGNQFGEWRCDEDDDDVQFVSVQPGTQTTTQVPVPLVQKALTSFPGFQPASQFKGQRE
DPRALHSQLTAQLKQKKATLSVVNMSALPDKGERLKSQVKDLEDALESLCLTTSTEPEPQ
GDEGNAKPKPTPSQYNPFSCPGGTVLLPIAPAPLQYQASTSSMGLQLSQGYTQMYGVNPQ
SQAFYGGRMTDNRLLAVKNATSEAIDHLHSSLESCPDPNAEVTDPKGIKVPLLAHQRQAL
AWLLWRETQKPCGGILADDMGLGKTLTMIALILAQKKKQKEEEKDTKLEGWISKNDSSLV
VSQGTLIICPASLVHHWKKEIERHVKSSRLSIYLYHGPNRQKNAKVLAEHDVVVTTYSLV
SKEIPVPKDDAEKPSKDPEDVPSALPPLLRVAWARIVLDEAHNIKNPKVQTSLAVCKLRA
KARWAVTGTPIQNNLLDMYALLKFLRCAPFDEFKLWKTQVDNGSKRGGERLNILTRTLLL
RRTKDQMDSTGKPLVNLPDRTCEVHRLKLSEEEQSVYDVVFAQSRSTLQNYLKRHEGDNG
KKGDNSNPFDKGKGVAREFGVSQADSVSSSQQTQGPTSTVHILSLLLRLRQSCCHLSLLK
KTLDPSELQGDGISLSLEEQLNALCLSTEPSGPDPKATVSLNGSRFASDLFEDTHESTKI
AAILTELKDIRQQSEAQKSVIVSQWTSMLHIVAVHLRRMGLSFAVIDGTVNPKRRMDLVE
EFNTNPKGPQVMLVSLCAGGVGINLIGGNHLFLMDMHWNPALEDQACDRIYRVGQHRDVT
IHRFVCEGTVEDKISILQEKKKDLAQKVLSGTGASFTKLSLADLRVIFGV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagattgtactatgcaatacccacggcagcacatgcatgctgaagacgggagtgaaa
gaagggccaaataagggtaaaagcttctacttgtgcggggagcgtcaacaggggtctccc
tgtgatttcaccaaagtggcagggatcccggcctcacactgcctgcttcatgaggattct
atggtggaactccagactctcattcgcagtcagcagcagcagggctacaggttgtactac
cggtgtgttttggggaagaacgcaggtcagaggtggtgtggcaatgttccctggacagcg
ccagaggcagagaaacgcagcccactctctgacagacagctgcagccctccagcctgccc
ccagagagaaatccattcaaggccccaggcaagactgaccagatgtcagagtggaggaga
ctccaagatggggggagactggaggatgagagcaacggaaagaatgagaaaggtggagag
aaggagaggcttcacaagagtgtaggtaaagaaagcgaacacggtcgaggtatggaggag
gaggagagggggatgtcaagtccctcggagtcttggagagacacacagcttccagcaggg
atgaagataaagaagagagtatcaggtgaggagaataaggaaagttctgaaacatcacct
gaggaaaaggaaaagactgtcaaggagatgaaagacaaaaacaagaactcaaacaaagac
agccagagagaggctgagaaaagcaacaactctagcccgaaaccccagaatacagaggac
ccacacaaagcctcaaagggtcgtcagggatactaccaacgagagccaccaaccaatagc
ctaaaagagtctggaaagcatgctgggaaaaagccaagcacagataggaagaagagcaac
ccctccgacccaaatggcactacctctaaagacgcccaagcacctaagagcacagagaag
accaaaaccccaatcccacaatctgataaaccagcgcagcgactttccactccaacaact
gaacaggataaggaggcagagaaaattgctgcgtcatcatcacagcagaaccaggacaaa
tcccattgtgggaaccaatttggagagtggcgttgtgatgaagatgatgatgatgtccag
tttgtgtcagttcagccaggtacacagacgacgactcaagtaccagtgcccctggtccag
aaagccctgacatccttcccagggttccagcctgcctctcagttcaaaggtcagcgggag
gaccccagggccctgcacagccagctcactgctcagctcaaacagaagaaggccactctg
tcggtggtgaatatgtctgctctgcccgataaaggggagaggttgaagagtcaggtcaaa
gacctggaggacgctctggagtctctctgcctcaccacttccactgagccagagcctcag
ggcgacgaaggtaatgccaaaccgaaacccactcccagccagtacaacccatttagctgc
ccgggaggcaccgtcctactgcccattgctcctgcccccctccagtaccaggcctccacc
agctcaatggggctgcagctcagccagggatacactcagatgtatggagtgaacccccag
agccaagcgttctatggaggcaggatgacagacaaccgtctgctagcggtgaagaacgcc
acctctgaggccattgaccacctccacagctccctggagtcctgccctgaccccaatgct
gaggttacggacccgaaaggcatcaaggtgcctctactggcccatcagagacaagctctg
gcctggctgctgtggagagagacccagaaaccctgtggagggatcctggctgatgacatg
ggcctggggaaaaccctcaccatgatcgctctcattctggcccagaagaagaagcaaaag
gaggaggagaaagacactaaattggaaggctggatctccaaaaatgactctagcctggta
gtgtctcagggcactttgatcatctgccctgcctctttggttcatcactggaagaaggag
atcgagagacacgtcaagagcagccgactcagtatctacctgtaccacgggcccaaccgc
cagaagaacgccaaagttctagctgagcatgatgtggtggtgaccacctacagccttgtc
tccaaggagatcccagtcccgaaggacgacgcagagaaacctagcaaggaccctgaggat
gtgccatcagccctccctcctctgctgcgggtggcctgggcccgcattgtgctggacgag
gcccacaacatcaagaatcccaaggtgcagacctccttggctgtgtgtaagctgagggcc
aaggccaggtgggctgttaccgggacccccatccagaacaacctactggatatgtacgcc
ctgctcaagtttctgcgctgcgccccatttgatgagttcaagctttggaaaacccaggta
gacaacggctctaagagaggaggagagcgacttaacattctgaccagaactctgctgctc
cgacgcaccaaagaccagatggactctaccggaaaacctctggtgaatctgccagatcgg
acctgtgaggtgcatcgcctgaagctgtctgaagaggagcagtctgtttacgatgtggtg
tttgcacagtccaggtccactctgcagaactatctgaagagacatgagggagacaatggt
aaaaagggagacaactccaatccctttgacaagggtaagggagtggctcgtgagtttgga
gtgtcccaggcggactctgtgtcctcctcccagcagacccagggccccaccagcactgtt
cacatcctgtctctattgctccgactcagacagagctgctgccatctgtctctgttgaag
aagaccctggatccgtctgagctgcagggggatgggatctctctctcccttgaggagcag
ctcaatgccctgtgcctctccaccgagccctctggccccgaccccaaagccaccgtgtcc
ctcaatgggagccgattcgcctccgatctctttgaggacacccacgagagcaccaagatc
gctgccattctcacagagctgaaggatatcaggcagcagagtgaggctcagaaaagtgtg
atagtgtcccagtggaccagcatgcttcacatcgtggccgttcacctgaggagaatgggc
ctgagctttgctgtcatcgacggcactgtcaaccccaaacgccgcatggacctggtcgaa
gagttcaacaccaaccctaaaggaccacaggtgatgcttgtgtctctgtgtgctggagga
gtgggcattaaccttattggagggaatcacctcttcctcatggacatgcactggaaccca
gctctagaggaccaggcctgtgaccgcatctacagagtgggtcagcaccgagacgtcacc
atccacaggtttgtgtgtgagggcacagtggaggataagatctccattctgcaggagaaa
aagaaggatctcgcacagaaggtgctgtcagggactggagcctccttcaccaagctctcc
ctggctgacctcagggtcatctttggggtctga
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