Oncorhynchus kisutch (coho salmon): 109869412
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Entry
109869412 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109869412
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109869412
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109869412
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109869412
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109869412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
109869412
NCBI-ProteinID:
XP_020315128
Ensembl:
ENSOKIG00005018744
LinkDB
All DBs
Position
LG24:34619416..34632892
Genome browser
AA seq
1044 aa
AA seq
DB search
MATTTSAAVTEPPGLETQRKEIESLLQEHELRAGDTWYLVERRWYEQWKEYVETGDQNSS
SFPGQIDNTELFEELDSYHLKERLVENEDFVLIPAEAWHKLLAWYGMVEVQPALERKVVD
LPSLVKVEVYPVEIFLCLHSNMENVVTAQFSRADHIHTIQKVMMTQFDVVEGAETRLWMK
SSDTSCERLRNVHVRVLDSCLSSGMTVIMEMRNADGTWPSSRPQIMRNSVEEQDSYRGQP
GVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLRNAYLEELNFTNPLGMKGEIAEAYADVI
KQMWSGRHYSVVPRIFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIE
LRDAAGRPDQEVAEEAWRNHRRRNDSAIVDTFHGLFKSTLVCPECRKVSVTFDPFCYLSV
PLPVSKDRVMEVFFVSLDPVAKPVQHRLVVPKAGKVFDLCSVLSEMTNIPANQMVVADVF
NHRFYKLYHADESLSCILDRDDIFVYELNRGSMEEEGDEVVLALYLRERSHYRDYGSGSS
SYGTSLFGHPLLMTVPRGQCSRDALYHLFLQRLARYVRPPDPSEEEDEEEGEDDDDDDDE
EEELYKTQTNGVSYDDGEDDCERPEPSKRDHCCDGVGQGPAVTQTQPDQTQESGGEAQAD
EGASSEVRAGCSTEDSASTSCSASASCSDGASGGAGASGGAGASGGAGASGGAGASGGAG
ASGGASVDASATGPTDSQQGAGHQQPCEEEEEERGECPPCLPQANRRQAKRKGCEARRRK
LLFSIQAVNSNGTTERGMGEDGSAFSFSSQPYVAMDWDPDMKKKYYNENEAEKYVKHQSM
EVPHQQTTVQLQECIELFTTVETLEEENPWYCPMCKKHQLATKKLDLWSLPEVLIIHLKR
FSYTKYSREKLDIIVDFPLRHLDFSGCLLRKTGTNGEPPSRYDLIAVSNHYGGLRDGHYT
SYARNKDNGQWYYFDDSKVTYAREEQIVTNAAYLLFYHRQDKIRQPTLPAPLDSSSPTQP
ANDVSSPKHDGMEGATPCVNMETD
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggctactactacttcagctgcggttacagaacctcctggattagagactcaacgcaaa
gaaatcgagtctttacttcaggaacatgaactccgtgcaggggatacttggtacctggtg
gagaggcgatggtatgagcagtggaaggagtatgtggaaacaggagaccagaactcctct
tcttttcctggacagattgacaacacagagctgtttgaggaactggattcataccacctg
aaggagcgtctggtggagaatgaggactttgtgttgatccctgctgaagcatggcataag
cttctggcctggtatggcatggtagaggtccagcctgccctggagcgaaaggtggtggat
ctgcccagcctagtcaaggttgaggtctaccctgtggaaatcttcttgtgcctccatagc
aacatggaaaatgttgtgacggcacagtttagccgtgctgatcacatccatacgattcag
aaggtgatgatgacgcagtttgatgtggtggagggggcagagacccggctgtggatgaag
agctcagacaccagctgtgagaggctgaggaatgtccacgtcagagtcctcgactcctgc
ctcagctctggcatgacggtgatcatggagatgaggaatgcagatggtacctggcccagc
tccagaccgcagatcatgaggaactctgtggaggagcaggactcttaccggggccagcca
ggagtctgtggcctcaccaatctgggaaacacatgtttcatgaactctgcactgcagtgt
ctcagtaacactcctccactgacggagtacttcctgaggaatgcctatctggaggagctc
aacttcaccaaccccctgggcatgaagggggagatcgcagaggcctacgctgatgtcatc
aaacagatgtggtcggggaggcactactctgtggttcccaggatcttcaagaccaaggtt
ggtcactttgcctcccagtttctgggctaccagcagcatgactcccaggagctgctctcc
ttcctgctggacgggcttcatgaggatctcaatcgggtaaagaacaaggagtacatcgag
ctgagggacgccgctggcaggcctgaccaggaagtggcagaggaggcatggcgtaaccac
cggagacggaacgactccgcgattgttgacaccttccacggcttgttcaagtccaccctg
gtttgccccgagtgccgcaaagtgtctgtcacctttgaccccttctgctacctgagcgtg
cccctgcctgttagcaaggaccgggttatggaggtattcttcgtctctctggatcctgtg
gccaaacctgttcagcatcgcttggttgtacccaaagctggcaaagtgtttgacctgtgc
tccgttctctcggaaatgaccaacatcccagccaatcaaatggttgtggctgacgtgttc
aaccatcgcttctataagctgtaccatgctgatgagtctctaagctgcatcctggaccgg
gatgacatatttgtgtatgagctgaacagaggctctatggaggaggagggggatgaggtg
gtgctggctctgtacctgagggagcgctcccactacagggactacggctcaggcagcagc
agctacgggacgtccctgttcggacacccactgctcatgaccgtgcctcgaggccagtgc
agccgtgacgccctctatcacctcttcctgcagcggctagcgcggtatgtccgaccacca
gatccctcggaggaggaggatgaggaggagggtgaagatgatgatgatgacgacgatgag
gaggaagaattgtacaagacccagaccaatggtgtcagctacgatgacggcgaggatgac
tgtgagaggccagaaccctccaagagggatcactgttgtgatggtgtcggccaagggcct
gctgtgacccagactcagccagaccagacccaggagtctggaggagaggcacaagctgac
gagggggccagcagtgaggtcagggcagggtgcagcacagaggacagtgcctcgacatcc
tgcagtgcctcggcatcctgcagtgatggagccagtggtggtgctggagccagtggtggt
gctggagccagtggtggtgctggagccagtggtggtgctggagccagtggtggtgctgga
gccagtggtggtgctagtgttgatgccagtgctacaggcccaacagacagccagcagggt
gcaggccaccagcagccatgtgaggaggaggaggaggagaggggtgagtgccccccctgc
ctgccacaggccaacaggaggcaggcaaagagaaagggctgcgaggccagacggaggaag
ctgctcttctccatccaggcggtcaactccaacggcaccacagagagaggcatgggagag
gacggcagtgccttctcttttagctctcaaccatatgtagccatggactgggatcctgac
atgaagaagaaatactacaacgagaatgaggcagagaagtatgtgaaacaccaaagcatg
gaggttcctcaccagcagaccacagtgcagctgcaggagtgcattgagctcttcaccact
gtggagaccttggaggaagaaaacccttggtactgcccaatgtgtaagaaacaccaactg
gccacgaagaaactggacctgtggtcactgccggaggttctcatcatccacctgaagcgc
ttctcttacaccaagtactccagggagaagctggacatcatcgttgacttccctctcaga
cacctcgacttttcaggttgtctgctgaggaagaccggtacaaacggagagccgcccagc
cgatatgatctgatagcagtttccaaccactacggcggactcagagatgggcattacacc
agttatgcccggaacaaagacaacggacaatggtattacttcgatgacagcaaggtgaca
tatgcaagggaggaacaaattgtgaccaatgctgcctacctcctgttctaccaccgacaa
gataagattcgccagcccaccttacccgcccccttggacagctcctctcccacccagcct
gctaatgatgtctcttcccccaaacacgatgggatggagggagccactccctgtgtcaac
atggaaacagactga
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integrated database retrieval system
