Oncorhynchus kisutch (coho salmon): 109869440
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Entry
109869440 CDS
T09179
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109869440
03015 mRNA surveillance pathway
109869440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109869440
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109869440
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109869440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109869440
NCBI-ProteinID:
XP_020315193
Ensembl:
ENSOKIG00005013828
LinkDB
All DBs
Position
LG24:complement(12207815..12212778)
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AA seq
493 aa
AA seq
DB search
MATDSWALAVDKQEATTDSFGSLVIRSLPRGGGDAAPNKAKKGTTKQVENGTNVDGEEKE
DKAAQSLLNKMIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKDKLLKGVYDMGFNR
PSKIQENALPMMLAEPVYYPSGSRPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWAQCL
CIAPTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGAKLQEQIVIGTPGTVLDWCS
KLKIINPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFAE
RVVPDPNIIKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRRTA
GWLAAELTKEGHVVALLSGEMTVEQRATIIERFREGKEKVLVTTNVCSRGIDVEQVSVVI
NFDLPMDKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFNKKINKL
DTDDLDEIEKISN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctactgactcttgggcccttgctgtcgataaacaggaagctacgactgactcattc
ggctccttggtgataagatctctacctcgaggtggaggtgatgctgcacctaataaggca
aaaaagggtaccacaaagcaagtggagaatggcaccaacgtagacggggaggaaaaagag
gacaaagcggcccagtcattgttgaataagatgatccacaccagccttgtgaacactacc
aatcaagtagaggttcttcagagggatcccaactctcctctttactcggtcaagacattt
gaagagctgaggctgaaagataagctgctgaagggagtgtatgacatgggcttcaacaga
ccctctaagatccaggagaatgccctgcccatgatgctggcagagcccgtgtattatccc
tctggttccagacctcagaacctgattgcccaatcacagtccggtacaggtaaaacagct
gccttcgtgctggccatgctcagccatgtcgacccaactaacaaatgggcacagtgtctt
tgcattgccccaacgtacgagctagctttgcagactggtaaagtcattgagcagatgggg
aaattctatcctgaggtgaaattggcatatgccattcgtggcaataaattggaccgaggg
gcgaagcttcaggagcagattgtcatcgggacacctggcacggtcttggactggtgctcc
aaactgaagatcatcaaccccaagaagatcagcgtctttgtcctggacgaggctgatgtc
atgatcgccacacagggtcaccaggaccagagcatccggatccaaagaatgttgccaaag
gaatgtcagatgctgctgttctctgccacctttgaggactccgtgtggaagtttgctgag
agggttgtgccagatcccaacatcatcaagctgaaacgtgaagaggagactctggacacc
atcaagcagtattatgtgctttgcagcgacaaggaggaaaagtttacagcactctgtaat
atctacggcgccatcaccatcgcccaagctatgatcttctgtcacacccgaaggacagct
ggctggctggctgcagagctgaccaaggagggccatgtggtggcgctgctgagtggggag
atgactgtggaacagagagcgaccatcatcgaacgcttcagggagggcaaggagaaagtc
ctggtgaccaccaatgtatgctccagaggcattgatgttgagcaagtttctgtggtgata
aattttgacctgcccatggacaaagatggaaacgctgacaacgagacataccttcaccgg
attggtcgcacaggacgtttcggcaagaggggccttgcagtcaatatgattgacagcaaa
cacagcatgaacattctcaaccaaatcgaggaacatttcaataagaagatcaacaagctt
gacaccgatgatctcgatgaaatcgagaaaatcagcaactag
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