Oncorhynchus kisutch (coho salmon): 109869495
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Entry
109869495 CDS
T09179
Name
(RefSeq) calcium-responsive transactivator-like isoform X6
KO
K15623
protein SSXT
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109869495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109869495
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109869495
GBAF(ncBAF) complex
109869495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109869495
NCBI-ProteinID:
XP_020315273
Ensembl:
ENSOKIG00005014201
LinkDB
All DBs
Position
LG24:26145598..26172457
Genome browser
AA seq
416 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQNKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMGSMGPGGMGQNGGSGPIHSQSNLNDAMTPGLPPPSMM
QSQMSNGPSHAPMQQQQQHAGQTQSAGPSSTPLSLPASTHCSALGYSHPVPPSSQGSMIQ
GPGPSPGYGSSSSSSSRSNLNMQSNPVSMMQQPHYPSSQTGAGQQHYQGQQTAMGMLGQS
GQGNSMVSQRPMGTYRPTQQGCALQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYS
YQQSSYGEQGYERPFDESSQHYYEGGNSQYSQQQAQYQHGSGQQQPFSQQQYPSQQGYST
QQQGYGPGQGASSQYSQYQQGQGQQYSSYRSSQAAPGAQTQRPYAYEQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcattttcatcggcgcgcccaaggagcaaaggggaggtgacacaacaaact
atacaaaagatgctggatgaaaatcaccatctgatacaatgtataatggattaccagaac
aaaggaaaaacagcagaatgcacacagtatcagcagattcttcacagaaacctggtctat
ctggctacgatagcagattctaatcagaacatgcagtcactgttacctgcgcctcctacc
cctaacatggggagtatgggtcctggagggatggggcagaacgggggcagtgggcccata
cactcccagagtaacctcaacgacgccatgacacctggcctgccccccccctccatgatg
cagagtcagatgagcaatggccccagccacgctcccatgcagcagcagcagcagcatgcg
ggtcagacacagtcggctgggccctcctccacgcccctcagcctgccggccagcacccac
tgctcagccttgggctacagccaccccgtgcccccctcttcccagggcagcatgatccag
gggcctggcccaagcccaggctacggttcttcctcttcttcctcctcccgcagcaacctc
aacatgcagtccaacccagtctccatgatgcagcagcctcattacccgtcgtcccagact
ggggccgggcagcagcactaccagggccaacagactgctatgggcatgttggggcagagc
ggacaaggcaacagtatggtgagccagaggcccatggggacttaccgacccacacagcaa
ggatgtgcactgcagtacatgggacaagacgagttctacggagagcagtatggacacact
cagagctccagtgagcccataaaccagcagtattaccctgatggtcatggcgagtactcc
taccaacagtcgtcctacggcgaacagggctatgagaggccctttgacgagtcctcacag
cactactacgaaggaggcaactcccagtacagtcagcagcaagcccagtaccagcatggc
tcaggtcagcagcagcccttcagccaacaacagtacccctcacagcagggctacagcaca
cagcaacagggctatggtccaggtcagggtgcgtcgtcccagtactcccagtaccagcag
ggtcagggccagcagtatagctcctaccgctcctcccaggctgcccctggggcacagaca
cagaggccctacgcttacgaacagggtcaatatggaaactaccagcaataa
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