Oncorhynchus kisutch (coho salmon): 109869552
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Entry
109869552 CDS
T09179
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130 isoform X1
KO
K06545
CD163 antigen
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109869552
CD molecules [BR:
oki04090
]
Proteins
109869552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Transcript_VP30
Motif
Other DBs
NCBI-GeneID:
109869552
NCBI-ProteinID:
XP_020315359
Ensembl:
ENSOKIG00005023012
LinkDB
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Position
LG24:35313863..35330300
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AA seq
1312 aa
AA seq
DB search
MWFLLLLWYASSPHLSSTQVEDRLILQGGDGPCEGYVEVFHDGKWGIVGDQKWQLNNEKV
ICKSIGCGTSISSKDIMLKKVRSTTWMNEVVCNGNEKYLWDCMFPGWNRSSNTKDTVKKI
TCSDKIQLELESLPGVRCAGTLRYKKMSMGKAKETGYFCNPKWDKKQADIVCEHLKCGQS
KGLPPARMFSQIENNVVLKPTHCSNTEHQKHIWQCITSPKVVCTEPVSVICSDHHNFRLQ
GGSNVCSGQLEVEEDEGVWKPVCQSQYKLNKSSDDLCSHMRCGKSHSQENMVCDSSKNIS
LDCTDKINISLLKDDQSQNVNHCFGSVHFNHSGTLEAVCSTNWDEKDGRVVCRELGCGEV
VLVGSGSKLQKDGKHDLVDCKDSEASLWHCLAMHHKNPTSCRKATVICSGSVKVRLSDGP
GRCAGRVEIQHEGVWKSIRESNWKEENSKVICNQMICGDAMANTDSFIQGTSQVLSNEVI
CTSNSKSISNCIKSTKKQPQQQDTNKMLICQEHAVVFLTGDCSGKVGIEQAGKTYWLSGS
NATFDRQTAMVVCQQMDCGDATSFTFESTSGTTDLWKYSYNCLERKKSLFDCERSEHLSN
HSIVSVVCSGSKTVRLKVDTKDEVKCWGKVEVCLDGTCGGVCEDAWTDKKSDMLCKDLDC
GSAIYPLSFLRKSQSALDKITVSSVHRTQQTTNISQCNMVKNVDQSYCKDKPAYVVCSGS
VKARLMEHRDRCSGNVQVFYQGNWIPVCKTALNNKDVQNTICREQGCGHGVKPLSFFGPS
SANSGAVVSGLTCSANSNSSAECTVTVTKTNNQQCALGGLQCSEWRRMMLKLGNGTCEGY
VFVYSEADSRAVSSDGWTETESKVLCKNLGCGAYIKHTAKEKADYHDLLWGKKYSCKGET
ISIWDCELNDRPSLNQSIYLQCQDDLKASLGETGNCSGKVLLNNLPVCYDNWSESHSKIV
CQEQQCSNSISFKEIDKGSRGDAHFVSCIGSESYLGQCKTIIGRCARGLVSVSCAGGVKF
NSTQKCGGNIKVFYRGTWESVCLPNMFSQEGRLLCKELGCGIPQSLRPDQIEQSEEEKEG
KIIPETSLKCSNENRNLQHCIIKKNECKTPGVIYCEDYPIKVPIPPIPINWYVGLSLGLL
SLVMVVALCFFMRRRFVTRFKSRFSTRKVSAFESGDYEDVETNGSELFGPMEMRDLKSHE
SESGGDKENGRRSTASSLSYDDIAEEENVPAQPVSSGEDGTSSPGPGAGPSATHEHATYE
VEEDQQESYDDVVSMITPAETREEIAEVHERPKPKCLAIHDDEDYLEPDGQK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcctcctactgctctggtatgcatcatccccacacctgtcctccactcaagtg
gaagacaggttgatcctgcagggtggggatggtccatgtgagggctatgttgaagtcttc
catgatgggaaatggggtattgttggtgaccagaaatggcagctgaataatgagaaggtc
atctgcaagagcatcggctgtgggacatccataagctctaaagacattatgttgaagaag
gttcggtctaccacatggatgaacgaggtggtgtgcaatggaaatgagaagtatctatgg
gactgcatgtttcctgggtggaacagaagctctaataccaaagatacagtcaaaaaaatc
acatgttcggataagattcagcttgagcttgagagtttgcctggggttagatgtgctgga
actctcaggtacaaaaaaatgtcaatggggaaggccaaagaaactggctacttttgtaat
ccgaaatgggataaaaagcaggctgatattgtgtgtgaacatctcaaatgtggccaatct
aaaggtctcccaccagccagaatgttctcacaaattgagaataatgtggtcctcaaacct
acacattgcagcaacacagagcatcagaaacatatctggcaatgtataaccagtcctaaa
gtggtatgtacagaacctgtctccgtgatttgctcagatcatcacaactttcgtttacaa
ggtggaagcaatgtctgttctggacagttggaagtggaagaggatgaaggtgtttggaaa
cctgtatgccaaagccaatacaagctgaacaaatcaagtgatgatctgtgttcacacatg
cggtgtggcaaaagtcacagtcaggaaaacatggtctgtgacagttccaaaaacatctca
ctggattgtacagacaaaatcaacatatccctgttgaaagatgaccaaagccagaatgtc
aatcattgttttgggtcagtacacttcaaccactctggcaccctggaggctgtgtgttct
actaattgggatgagaaggatggacgagtcgtgtgccgagagttgggttgtggagaggtt
gtgttagtcggctctgggagtaaactccagaaagatggaaagcatgacctagtagattgc
aaagactctgaggcttcactgtggcactgtctggccatgcaccataagaacccaacctca
tgcaggaaagccactgtcatctgctcaggtagtgtgaaagtgcgtttgtcagatggccct
gggaggtgtgctggaagagtagagattcagcatgaaggagtgtggaagagcatccgtgaa
agcaactggaaggaggaaaactccaaagtgatttgcaatcaaatgatttgtggtgatgct
atggctaatactgattccttcattcaaggaacaagtcaagtattgagcaatgaggtgatc
tgtactagtaactctaaatctatctctaactgtatcaagtcaaccaagaaacagccacaa
caacaggatacaaacaagatgttaatctgccaagagcatgcggtggtgtttctgacgggg
gactgctctggcaaggtgggcatagagcaagctgggaagacttactggctgtctgggtct
aacgccacttttgatcgtcaaactgccatggtggtgtgtcaacagatggattgtggggat
gctacctcatttacctttgaatccactagtggaaccactgatttgtggaaatactcttac
aactgcctggaaaggaaaaaatccctttttgactgcgagcggagtgagcatctgtcaaac
cacagtatagtctctgtcgtctgctcaggtagtaaaacagtacgcctgaaagttgacact
aaagacgaggtaaaatgctggggaaaggtggaggtgtgcctcgacggaacgtgtggaggt
gtttgtgaggatgcctggacggataagaagtccgacatgttgtgtaaagacttggattgt
ggatcagccatctatcctctgtccttcctgagaaaatcacaatcagctttagacaaaatc
accgtcagcagtgtgcacagaacccagcagacaactaacatcagtcagtgcaacatggtc
aaaaacgttgaccagtcttactgtaaggacaagccagcctatgttgtttgctcaggaagt
gtcaaggccaggctaatggagcatagagacagatgctcgggtaacgtacaggtgttctac
caaggaaattggatccctgtctgtaagactgccctaaacaacaaagatgtccaaaatact
atatgccgagagcagggttgtggacatggtgtcaaacctctctcgttctttggcccttca
tctgcaaacagtggggctgttgtgtcaggcctcacctgtagtgcaaacagcaattcttcg
gcagagtgcacagttacagttactaagaccaacaaccaacaatgtgccctcggtggtctc
caatgctctgaatggaggagaatgatgttgaagttagggaacgggacttgtgaagggtac
gtgtttgtgtacagtgaagcagacagtcgggctgtcagcagcgatggttggactgagaca
gagagcaaggttttgtgcaaaaacttgggctgtggagcctacataaaacacactgctaag
gaaaaggcagattatcatgatctcttgtgggggaagaagtacagctgtaaaggggagaca
atcagcatctgggactgtgaactaaacgacaggccctctctaaaccagtcgatctaccta
cagtgccaagatgatctcaaagcaagcctgggagaaacaggtaactgctctgggaaggtg
ctgttaaataacttgccagtgtgttatgataactggagtgagagtcactccaaaatagta
tgtcaagagcagcagtgtagcaacagcatctcattcaaagaaatcgacaaaggaagtcga
ggtgatgcacatttcgtcagctgcattggctcggagtcctatctcggacagtgcaaaaca
ataataggaaggtgtgctagaggattggtttctgtgtcctgtgcaggtggtgtgaaattc
aattcaactcagaaatgtggagggaacattaaggtattttatcgaggcacctgggagtcg
gtatgtctaccgaatatgttctcacaagaaggtcgattactttgcaaagagctaggatgt
ggcattcctcaaagtctccgaccggatcagattgaacagtcagaagaggaaaaagaagga
aaaataataccggagacatctctcaaatgttccaatgagaatcgcaatttacagcactgc
atcatcaagaagaatgaatgtaaaacacctggtgtaatctactgtgaagattatccaatc
aaagtgcccattcccccgatccccatcaactggtatgttggtctttcccttggactgttg
tctctggtcatggtcgttgccctctgcttcttcatgcgaagacgatttgtaaccaggttc
aagtcgagattctcaacgagaaaagtgtctgcttttgagagtggagactatgaggacgtg
gaaaccaacggaagtgaactatttggaccaatggaaatgagagatttgaaaagccacgaa
tcagagagtggcggagacaaagagaatggcagacgaagtactgcgtcttccctgtcttat
gatgacattgctgaggaggagaatgtcccagctcaaccagtatccagtggagaagatgga
accagtagcccaggcccaggtgctggaccttctgctacccacgaacatgctacctacgag
gtggaggaagatcaacaggagagctatgatgatgtggtgtcaatgatcacgccagctgag
accagagaggagattgcagaggtccatgaaagacccaagcccaaatgcctggcgatccat
gatgacgaggattacctggagcctgatggtcagaagtga
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