Oncorhynchus kisutch (coho salmon): 109869658
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Entry
109869658 CDS
T09179
Name
(RefSeq) laminin subunit beta-3-like
KO
K06244
laminin, beta 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04382
Cornified envelope formation
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109869658
04518 Integrin signaling
109869658
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109869658
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109869658
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
GldM_1st
KASH_CCD
hEGF
DUF745
GEMI5_RBS
DUF8567
CCDC171
Wbp11
CEP135_TSGA10_CC
CCDC39
ATG17_like
Motif
Other DBs
NCBI-GeneID:
109869658
NCBI-ProteinID:
XP_031689921
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All DBs
Position
LG1:complement(45707191..45737199)
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AA seq
1152 aa
AA seq
DB search
MWILFHLAALTAVAATQRDCSRGACYPPMGDLLLGREHQLHASSTCGLAGSEVFCTYFGQ
WRMKCCTCDSRNPSSQLAHTIQNVLSTAGPNRWWQARKDVSPVTLQLDLQNLFQLDTIIL
AFKGPRPSALVVERTLDNGQTWQPSLYMASDCRSAFPGIAMTMPRSLDQTYCYTLPPVPA
NSYQDQTIQFSPLRQFSSISVPNGQKIQEVSGLTGLRVKLTELGAVPRLPGRTPSLFYAL
REMRVMGTCLCHGHANRCLQDTTANQMPSIQVSAQCECQHNTAGVNCEQCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
PNHRSSIDQPDACIRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNPLGCTKCFCSA
EGSLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSLHGCEPCRCDPTNSHGDTCDRS
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRLCQCAAGGMVPGGCDKRTGACRCRIGVIG
THCDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSTRIPSRPGGSLPTGVGLR
IQALEATLIQIRDSLPLPTPSMRQVNDALFQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELHALLGGLGLLYNSKRDALRNPINSNNAGAFSSIKNAYDKSTDAAKSVDASGKTVDQSS
AVREDALDLQNQVQPENTRDLEKLNQQLNTKPDLSPTAKQVCGSVHSAPCTPAQCDGELC
PAERAPPCGRGESCVGALPLGTRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNLVR
QSTDDLVNQMRRARDDLEADLQETRYFVKELKDFLSDPSSDPTDISTVSEWILNAKLPLS
LAALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGLL
EGFTALEGSLSGLNDKVQDSLDIVEDISNSLAQTKAQLTPAVKALGEVSALADGMKPQLE
GLKALVRSGGLLAQNAEGEANKANKEADAATRDLASLEKQLEQLRAAERTSGHGDGTGPT
GERLRKLQEEAGSLAQDTGDMMKALAGKADSLRRLQDEVLLKSQRLTGLDGKLRDLLADM
RQKVKILSTCQG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccacttagcagccctgacagcagtggctgcgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaacatcagctt
catgcctcctccacctgcggccttgccggctctgaggtgttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccaggaacccatccagtcagttggctcacacc
atccagaacgttctatccaccgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccctacagttggacctacagaacctgtttcagctggacacaatcattctg
gccttcaagggtccccgccctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcactctacatggcctcagactgtcgctcggccttccctggcattgcc
atgacaatgccacgctctctggaccagacctactgctacaccctaccccctgtccccgct
aactcttaccaggaccagactattcagttcagccccttgcgccagttctctagcatcagc
gtccccaatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttg
actgagctgggtgctgtgccccgcttgcccggccgcaccccctctctgttttatgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgccaaccagatgcctagcatacaggttagtgctcagtgtgagtgtcagcac
aacacagcaggtgtaaactgtgagcaatgtgctgatctctacaacgacttgccctggaga
tctgcagaggaaggaaacacacacacctgcaaacgttgtgagtgtaacaaccacgcccag
cggtgccgtttcgacccatctgtgtatgaggcgagtggatggaggagtgggggagtgtgt
gagggctgtctgcaccacacaaccggtcctaaatgtgaccgctgtgcccctggataccaa
cccaaccaccggagcagcatagaccagcctgatgcctgcatacgctgccattgcagtgca
gagggggcggagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatg
ggatactatggcctgactgcctccaaccctctgggctgcacgaagtgcttctgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttac
caccaggggctgacttgtgaactctgttcccgtggttactggaacccctcctccctccac
ggctgtgagccctgtcgctgtgaccccaccaactcccatggtgacacctgcgaccggagt
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgtcctgac
aacacttatggagaccccctcattggctgcagactgtgtcagtgtgctgctggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggt
actcattgcgatgcctgtagccgaggccatgtttactcctttcccgactgtgaagtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctagagaga
ctctccaccagaatcccctctcgtcctggcggctcgttgcccaccggtgtgggtctccgc
atccaggccttggaggccactctcatccagatacgtgactctctcccactcccaactccc
tctatgagacaagtcaacgacgccctctttcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggccgaggcctcgagctaggctcacagctggac
gagttgcatgctctcctgggcggtctgggtctgctgtacaactccaagagagatgctcta
aggaaccctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgac
aagtccacggatgcggcgaagagtgtggatgctagtgggaagactgtagatcaatcttca
gcggtcagagaggacgctcttgacctccagaaccaggttcaaccagaaaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaagcag
gtgtgtggcagtgtgcactctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagagggcgccaccctgtggtcgtggcgagagttgcgttggggctctgcctctg
gggacccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgctgcacagatccagaaaacacaggacacggtcaatctggtcaga
cagtccacggacgatctggtcaatcagatgaggcgggccagggatgacttggaggcagat
ctgcaggagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcgtca
gacccaacagacatcagcacggtgagtgagtggatcttgaacgccaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggagatcagagccctggcggcaggactcccagac
agcaaagcagtcctggaccaggctggaccacagctcgacaccgcccggcgcctgctacag
gaggcccaggacgccagggacgctgggctgggtgtgaaggatgatgttgacgggctgctg
gagggcttcaccgccttggagggctctctctctggcctgaacgacaaagtgcaggacagc
ctggacatagtggaagacatcagcaacagtctcgcacagaccaaggcccagttgactccc
gcggtgaaggctctaggggaggtgtctgccctggctgacggaatgaaacctcagctggag
gggctcaaggcgctggtgcgctctggaggtctgctggcccagaatgctgagggagaggcc
aataaggctaacaaggaggcagatgctgcgaccagggacctggcgtccctagagaagcag
ctggagcagctgcgtgctgcagagaggaccagtggtcatggcgatgggacggggccgaca
ggtgagcgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
atgatgaaggcactagcaggtaaagcagactctctgcgtaggctacaggatgaggtccta
ctgaagtcccagaggctgaccggtctagacggcaaactgcgggacctcctggctgacatg
agacagaaggtcaagatcctctccacctgccagggctga
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integrated database retrieval system