Oncorhynchus kisutch (coho salmon): 109869769
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Entry
109869769 CDS
T09179
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X2
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03320
PPAR signaling pathway
oki04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109869769
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109869769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109869769
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109869769
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109869769
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
109869769
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
109869769
NCBI-ProteinID:
XP_020315616
Ensembl:
ENSOKIG00005015625
UniProt:
A0A8C7G5F9
LinkDB
All DBs
Position
LG24:26672763..26687267
Genome browser
AA seq
710 aa
AA seq
DB search
MSFELGTLDLAEMENRMNSSDMKTLSTLDHLYLSPLEHSLNIPHHHSPDRNHLFNHSSDR
NYSFNHSPDINHSFNHSPDINHSFNHSPDINQSFNHSPDINHSFNHSLDINHSFNHSPDI
NHSLHHSSDINHSFNHSPDRNHSFNHSPDRNHSFNHSPDINHSFNHSPDINHSFNHSLDI
NHSFNHSPDINHSLNHSSDINHSFNHSPDRNHSFNHSPDRNQSFNHSPDINQSFNHSPDR
NHSSNHSPDINQSFNHSPDLNQSFNHSPDRNHSSNHSPHRNHLFNYPYNYTYSSLKEESM
SPLWSSNCSVVSLSRPTLHSKSPTYTDPSTLLYIDCRVCGDTASGFHYGVHACEGCKGFF
RRTMRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLLVGMSHDAIRFGRMPQEEREKLLA
EFMDVSPRSPESADLRALSRQLCLSYHRHFPLTKSRARAILSGKTHGNSPFVIHDMKSLT
AGQDFINSRQFPFLEHQRSVLPPQEPAGELELFFFRQVQFRTAEAVREIIEFAKSIPGLT
ELDINDQVTLLKYGVIEVMLIMLAPLMNKDGTLFAYGQIFMTREFLKCLRKPFCEMMEPK
FEFAVKFNVLELDDSDTALFLAVIILSGDRPGLVNVKPIEDLQEAVLQALELQLKTIHPD
CPQLFARLLQKMTDLQPLVADHVRLIHLLKKQERETCLHPLLQEVMRDLY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgagctgggcacattggacctggcagagatggagaacaggatgaatagttct
gacatgaagaccctgtcaaccctggaccacctttacctctcccccctagagcacagcctc
aacattccccaccaccacagcccagacagaaaccacttattcaaccacagctcagacaga
aactactcatttaaccacagcccagacataaaccactcatttaaccacagcccagacata
aaccactcattcaaccacagcccagacataaaccagtcattcaaccacagcccagacata
aaccactcattcaaccacagcctagacataaaccactcattcaaccacagcccagacata
aaccactcattgcaccacagctcagacataaaccactcattcaaccacagcccagacaga
aaccactcatttaaccacagcccagacagaaaccactcattcaaccacagcccagacata
aaccactcattcaaccacagcccagacataaaccactcattcaaccacagcctagacata
aaccactcattcaaccacagcccagacataaaccactcattgaaccacagctcagacata
aaccactcattcaaccacagcccagacagaaaccactcatttaaccacagcccagacaga
aaccagtcattcaaccacagcccagacataaaccagtcattcaaccacagcccagacaga
aatcactcatccaaccacagcccagacataaaccagtcattcaaccacagcccagactta
aaccagtcatttaaccacagcccagacagaaatcactcatccaaccacagcccacacaga
aaccacttattcaactacccatacaactacacatacagttcgttaaaagaggagtccatg
tcccctctttggtctagcaactgtagcgttgtcagcctgtccagacccactcttcactcc
aagtcccccacttacacagaccccagcactctgctctacattgactgcagagtgtgtggg
gacacggcctcaggcttccactatggagtccatgcctgtgagggctgcaagggattcttc
cgaagaaccatgaggttaaaactggtgtatgaccactgtgatctgcattgtcggattcac
aaaaagagccggaataaatgccagtactgtcgctttcagaaatgtctgcttgtgggcatg
tcacacgatgccatccgcttcggccggatgccccaggaggagagagagaagctgctggct
gagtttatggatgtgtcccccaggagcccagagtcagcggacttgagagccttgtccaga
cagctgtgtctgtcctatcacagacactttcccctgaccaagagcagggccagagccatc
ctgtctgggaagacccacggaaactcaccgtttgtcatccatgacatgaagtccctgaca
gcgggtcaggactttataaacagtagacagttccctttcctggagcaccagaggtctgtc
ctgccccctcaagagcctgccggggagctggagctcttctttttccggcaggttcagttc
cgcaccgccgaagctgtacgagaaatcatagagtttgccaagagtatccctgggttgaca
gagctggacataaatgaccaggtgaccctgctgaagtacggggtcatcgaggtcatgttg
atcatgctggcgccgctgatgaacaaggacggcacactgttcgcctacggacagatcttc
atgacccgggagttcctcaagtgtctgaggaagccattctgtgagatgatggagccaaag
tttgagtttgcggtaaaattcaacgtgctggagctggacgatagtgatacggcgctcttc
ctcgctgtcatcatcctcagtggagaccgtccaggcctggtgaatgtgaagcccatcgag
gacctccaggaggcagtactgcaggccttggagctgcagttgaagaccatccacccagac
tgcccccagctgtttgccaggctgctgcagaagatgaccgacctgcagccgctggtggct
gaccacgtccggctcatccacctgctcaagaagcaggagcgggagacgtgtctgcacccc
ctactacaggaagtcatgagggacctgtactag
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