Oncorhynchus kisutch (coho salmon): 109869803
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Entry
109869803 CDS
T09179
Name
(RefSeq) mRNA export factor isoform X2
KO
K14298
mRNA export factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109869803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109869803
03036 Chromosome and associated proteins [BR:
oki03036
]
109869803
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109869803
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109869803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_Nup120_160
ExoI_SH3
Beta-prop_WDR41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
109869803
NCBI-ProteinID:
XP_020315652
Ensembl:
ENSOKIG00005050545
LinkDB
All DBs
Position
LG24:complement(24034718..24046175)
Genome browser
AA seq
365 aa
AA seq
DB search
MSLFGASTGFGAGGFGAATTDTHNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWA
NDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSEDGSKVFTASCDKTAKMWDLNSNQAIQI
AQHDAPIRTVHWIKAPNYNCIMTGSWDKTLKFWDTRSPNPMMSLQLPERCYCADVVYPMA
VVASADRGLIVYQLENQPSEFRRIDSPLKHQHRCIAIFKDKQNKPAGFALGSIEGRVAIH
YINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKD
ARTKLKTSEQLDQPITACSFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNATEELK
PRNKK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcggggccagcactggctttggcgctgggggatttggagcggcaaccacg
gacacccacaacccaatgaaggatgtggaagtaacctcacccccagatgacagcatcagt
tgcttggcgttcagtcctcctgccatgccagggaacttcttgatagggggatcctgggcc
aatgatgtgaggtgttgggaggtacaggacaacgggcagacagtccccaaagcccagcag
atgcacacgggtcccgtccttgatgtctgctggagcgaagacggtagcaaggttttcact
gcgtcttgtgacaagactgccaaaatgtgggacctcaacagcaaccaggcaatacagatc
gcacagcatgatgctcctatcagaacagtccactggatcaaagcccccaactacaactgc
atcatgactggcagctgggacaaaactctgaagttctgggacacccgctcgcccaaccca
atgatgtctctgcagttgccagagaggtgctactgtgcagacgtggtgtaccccatggca
gtggtagcgtctgcagaccgaggtttgattgtatatcagcttgaaaaccagccgtctgag
tttaggaggatagactcaccactcaaacaccagcaccgctgcatagccatttttaaggac
aaacagaacaagcctgctggatttgctctcggaagcattgaagggcgggttgcaattcac
tacatcaaccctcctaatccagccaaggataacttcacctttaagtgccacaggtcgaat
ggaaccaacacagccacaccacaagatatctatgctgtaaatgccatctccttccaccct
gtccacgggacactggcgactgttgggtcagatggtcgcttcagcttctgggataaagat
gcccgcaccaagctgaagacctctgagcagctggatcagccaatcacagcatgctccttc
aacaacaatggcaacatctttgcttacgcctccagctatgattggtcaaagggacatgag
tactacaaccctcagaaaaagaactacatcttcctgcgtaatgctactgaggagctgaaa
ccacggaacaagaaatga
DBGET
integrated database retrieval system