Oncorhynchus kisutch (coho salmon): 109869903
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Entry
109869903 CDS
T09179
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04136
Autophagy - other
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109869903
04136 Autophagy - other
109869903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109869903
03029 Mitochondrial biogenesis [BR:
oki03029
]
109869903
Membrane trafficking [BR:
oki04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109869903
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109869903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
CPSF_A
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
109869903
NCBI-ProteinID:
XP_020315793
Ensembl:
ENSOKIG00005010726
LinkDB
All DBs
Position
LG25:complement(22684702..22693023)
Genome browser
AA seq
452 aa
AA seq
DB search
MEDRETFDGRGGPQDLISSSFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAESPDVY
IVERLFSSSLVVMVSLSMPRRMNIYHFKRGTEICNYSYSNNILSVRLNRQRMVVCLEESV
YIHNIKDMKLLKTLLNIPHNPSDTPSNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDAN
NLSTVTMIPAHDSPLAALAFNVSGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVS
ISSLSFSSDAQFLCASSNTETVHIFKLERHSPSREGGCPTWGAYVGKMFTAASTYLPSQV
SDMMHQDRAFATVRLNMFGLKNICALATIQKLPRLLVASSDGHIYIYNIDTQEGGECVLV
RKHRLFEGDKEPQEEQQEEEELEDRRSLPPSNSPSYAATVALPSTPPSSTTLTGYLDGGA
KKGNVIPEHEFTKGPVCLDDKNEFPPVNNQSN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgggagaccttcgacggtcgaggagggcctcaagacttgatcagctcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcggtggacaagatggactgcatccatgaaggagcggagtctccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggtgatggtcagtctctccatgccccga
cgtatgaacatctaccacttcaagagaggaacagagatctgcaactatagctactccaac
aacatcctctcagtcaggctcaacagacagaggatggtagtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctcaagacactgctcaacataccacacaac
ccctcagacacaccctccaacccgtcaggtctctgtgccctctctgtgaaccatggtaac
tcctacctggcgtaccctggcagtcagaccatcggggagatcatggtttatgacgccaac
aacctgagcacggtgacgatgatcccagcccatgacagtccccttgcagctctcgcattc
aacgtgtcaggaaccaaactggccagcgcctccgagaggggtacagtgatccgagtgttc
accatcccagagggacaaagactgtttgagttccgcagagggatgaagaggtacgtgagt
atcagctcattgtcctttagttcagacgcccagttcctctgtgcctccagcaacaccgaa
acggtccatatcttcaaactggaacgtcacagccccagtcgagaggggggatgtcctacg
tggggtgcatacgtgggaaagatgttcacagcagccagcacctaccttccctcccaggtc
tctgacatgatgcaccaggaccgggccttcgccactgtacgacttaacatgttcggtctc
aagaacatctgcgccttggccacgattcagaagctgcctcgtctgctggtggcgtcatca
gatggacatatctacatctataacatcgacacacaggagggaggagagtgtgtgttggtc
aggaaacatagactatttgaaggagataaggagccacaggaagaacaacaggaagaggag
gagcttgaggatagaaggtccctcccaccgtcaaacagcccatcatacgctgccactgtg
gctctcccctcgaccccaccctcttctaccactctcacaggctacttagatggaggggct
aagaaaggtaatgtgatccctgaacatgagtttaccaagggacccgtctgtctggatgac
aagaacgagtttcctccagtcaacaaccagagcaactga
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