Oncorhynchus kisutch (coho salmon): 109869994
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Entry
109869994 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109869994
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109869994
04082 Neuroactive ligand signaling
109869994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109869994
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109869994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109869994
NCBI-ProteinID:
XP_031660443
Ensembl:
ENSOKIG00005035454
LinkDB
All DBs
Position
LG25:15857142..15956139
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AA seq
1366 aa
AA seq
DB search
MSSCSREPKVAFCLIPRVLSQVNPVTVLVNDTNPRALLTRLCETMATEKLHGVVFEDDVG
SGAGPQILDFLSTQTALPIVGISGGSTVVIPHKAEGSTFLQMGASLEQQIVCMFKLMEEY
DWGDFVVITSMWPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSVGTSDVRAKRMLQQID
SQVLLAYCSYEEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPPPISFPVGLIGVITD
HWRKSLRQRVREGVAIVAKGADSFRRHQGFLPEGHSDCNTPVTHINNNTLFRHMLNVTWE
RKDLSFNSDGYLTNPSMAIIALDRDRLWDKVGTLERGILQVRYPVWPRYGSFLETVSDDR
HLTVATLEERPFVIVENVDPDTGTCVRNTVPCRRQSNRTESIVGHSEPYTKLCCKGFCID
ILKKLSRTIKFSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEII
DFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPV
GYNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFL
ASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMH
AHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYG
IALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFY
MLLVAMGLSLLVFAWEHLLYWKLRKKLDKSPRMDFLLAISRGIYSCFNGVEEPDHPNLAN
SDLTTNYAQANMLKMLRTAKDLVNSAQVETSLDHATKTIEHWGRHGGNLPVHIPQQVTTE
MVPGGFSHVTENTHTHLSPEHPLIPQYCTLGVVTSLNRQKGLARPTPLRYTLPARTSSLY
DRPLSVSSLSSPHLDLAGGDPLSSYSQPSTGRLYVEPQHISHPRSPFIPYSELQLPDIYP
FSHHPSAISHPSHTEPSRKNRRSKSLLSGESGGGEWRRRREEKTVCLGELRANHLQENNV
SPQMPDSLYPGTMLCPGVEGCVGSWPVPLEELVLAGRPRLHRRPSFLRATWGSERILQPD
ETLPTSLDCQSHSALPDLFPCVMADQENPTKLYNPAPLRNNLCYPATSTRQHAYLHIRQD
QRKGNGRKKLRYSNSTHLPTYREAMLGGQGGGGGVGLGGVRRATNLLSRQYSHYLTSYPG
LPLYHGPLDLQAHSQASSNHASPSPGTYPSPSPVCQLLPCGGFRGQRGLLYQDSLYGAYG
ANGAYREDQDPGLEPQRGDTSVGLRSENRSCVTQPWGRVSSLESEV
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctgctctcgagaacccaaggtggcattctgccttatccctagggttctcagc
caggtgaacccggtcactgttctggttaacgacaccaaccctcgtgccctgctgacacgt
ctctgtgaaaccatggcgacagagaaactgcatggggtcgtgttcgaggacgatgtggga
tcaggagctggacctcagatcctagacttcctgtcgactcagacagctctgcccatcgtt
ggcatcagtggaggatctaccgttgtcatacctcacaaggctgagggttccacgtttctc
cagatgggtgcctccctggagcagcagatcgtctgcatgttcaagttgatggaggagtat
gactggggagactttgtagtaatcaccagcatgtggccgggatacgagacgtttgtagac
tacgtccgatcctacacggacacttcctacttcctgtggaggctacaagatatcctgtct
ctggagatgtctgtcggaaccagtgacgtccgagccaaacgcatgttacagcagattgat
tcccaggtgctcctggcctactgttcctatgaagaggcccagtacctgttccaggtagca
ggggaggtgggtctactggggcctgggtacatctggatcctcccctccctcgcgctgggc
aacacagagagccctccacctatcagcttccctgtaggactgattggggtcatcactgac
cactggaggaagagcctgaggcaacgtgtcagagagggcgtggccatagtggccaaaggg
gcggatagtttcagaaggcatcaagggttccttccagagggacacagcgactgcaacaca
ccagttacacatatcaacaacaacacactgttcagacacatgctaaatgtgacatgggag
cgtaaggacctgtcgttcaacagtgatggctacctgaccaacccctccatggccatcatc
gcactggacagagacagactgtgggacaaggtgggaacattagagcggggtatcctccag
gtgcgttacccggtgtggcctcgctatggcagttttctggagacggtatcagatgaccgc
cacctgacggtagccactctggaggagaggcccttcgtcatcgtagaaaacgtggacccc
gacacgggcacctgcgtacgcaacaccgtgccttgccgacgccagtccaaccgcaccgag
agtattgtgggccactcggagccctacaccaagctgtgctgtaaggggttctgtatagac
attctgaagaagctgtctcgcaccattaagttctcctacgacctctacctggtcactaac
gggaaacatggaaagatgatcagtggcatctggaacggcatgatcggagaggtgttctat
aggaaagcagacatggccataggttctctcaccataaatgaggagcgttctgagatcatc
gacttctccgtgcccttcgttgagacgggcatcagcgtcatggttgcccgtagcaatggg
actgtctccccctccgccttccttgagccctatagcccagcggtgtgggtgatgatgttt
gtaatgtgcctgaccgtggtcgctgtgactgtattcgtgtttgagtacttcagtcctgtc
gggtacaaccgaagcttggtcagtgccaaagcgcccggaggtcctaccttcaccataggg
aagtcagtgtggctactgtggggcatcgtgttcaataactcagtccccattgagaaccct
aaaggcacaaccagtaagatcatggtgttggtgtgggccttcttcgctgtcatcttcctg
gcctcctacactgccaacctggctgccttcatgatccaggagcagtacatagacactgtg
tctggactgtctgacaagaagttccagaagcctcaggagcactaccctccattccgtttt
ggtacggtccctaacggcagtacagagaggaacatcagaagtaactaccctgacatgcac
gcacacatggtcaaatacaaccagaaaggagtggaggatgccctcaacagcctcaagaca
gggaagctggacgcattcatctatgatgctgcggtgttgaactacatggcagggaaggat
gagggctgtaagcttgtgactatcggctctgggaaagtgtttgccacgacaggctatggt
atagccctgcagaaagattccagatggaaacgacccattgacctggccttgctgcagttc
ctgggagacggtgacacccagcgcttggagacagtctggctgtcaggcatctgtcagaat
gagaagaacgaggtgatgagtagtaagctggacatagataacatggccggggtcttctac
atgctactggtggccatggggctcagtctcttggtgtttgcctgggaacatctactctac
tggaaactacgcaagaaactagacaagtctcctcgcatggacttcctgctcgctatcagc
aggggaatctacagttgcttcaacggggtggaggaaccagaccaccctaacctggcaaac
tcagatctgacaactaactacgcccaggctaacatgcttaagatgttacgcaccgctaaa
gacctggtcaactctgcccaggtcgagacctcactggaccacgccaccaagaccatagaa
cactggggtcgccatggcggcaacctgccagtccacattccacagcaggtcaccacggaa
atggttccaggagggttttctcatgtcacagagaacacacacacacacctgtcccccgag
caccccctcatcccgcaatactgcacgctgggtgtagtgacttctctgaacaggcagaag
gggctggcaagacccacgcccctacgatacacgctcccggctcgcacttcctccctctac
gacagaccactttctgtttctagtctcagtagccctcaccttgacctggctggaggggac
cccctctcttcctactctcaaccctccacaggtaggctgtatgtggagccccagcacatc
tcccatccccgctctcctttcatcccctatagtgagcttcagctgccagacatctacccc
ttctctcaccacccctctgccatctcccatccatcccacacagaaccctccaggaagaat
aggaggagcaagagcctcctctcaggggaatcaggaggaggagagtggaggaggcgcagg
gaggagaagacggtgtgtctgggtgaactccgggccaaccacctccaggagaacaacgtc
tcaccccagatgcccgactccctgtacccaggaacgatgctctgtcctggggtagaaggc
tgcgttggctcctggcctgttcccctggaggagctggttctggcaggcagaccgaggctc
caccgacggccatctttcctccgagccacctgggggagtgagcggattctccagccggac
gaaactctgcctacatcccttgattgccaatcacattctgctttaccagacctgtttccc
tgcgtcatggccgaccaagaaaatcccactaaactctacaaccccgcccccctccggaac
aacctatgctaccctgccacctcaactcgccagcatgcatatctccatataaggcaggac
cagaggaaagggaacggacgtaagaagctgcggtactcaaactccacccacctgcccacc
tacagggaggccatgctggggggtcagggaggcggagggggggtaggccttgggggggtc
cggagagccaccaacctgctcagcagacagtactcccactatctaacctcctaccctggg
ctgcctctctaccatggtcccctggacctccaggcccattcccaggcatccagcaaccac
gccagccccagccccgggacataccctagtcccagcccagtatgccagctcctgccctgt
ggtggctttcgaggccagagggggttgctgtaccaggacagtctgtatggagcctatggg
gccaatggagcctaccgagaggaccaggatccgggcttagagccccagagaggagataca
tcagtaggtttgaggtctgagaacagatcctgtgtgacccagccctggggacgcgtgtct
agtctggagtcagaggtctga
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