Oncorhynchus kisutch (coho salmon): 109870044
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Entry
109870044 CDS
T09179
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X2
KO
K03267
peptide chain release factor subunit 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109870044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109870044
03012 Translation factors [BR:
oki03012
]
109870044
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109870044
Translation factors [BR:
oki03012
]
Eukaryotic type
Release factors
109870044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
DUF5096
Motif
Other DBs
NCBI-GeneID:
109870044
NCBI-ProteinID:
XP_020315952
Ensembl:
ENSOKIG00005006595
UniProt:
A0A8C7D416
LinkDB
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Position
LG25:20751349..20762983
Genome browser
AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDVKARAAAGLQSALAALSVNAKPFIPNVDAAVFVPTFLQSSPTEI
SNSYGHGAEPVASMEVLETVAPVENGGGTEADMAVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEEAQGREEVEMMEEEEEEELPVLKVIPLPPNAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIILVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKDPI
EECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGSIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagcaccggattcgtgggagcaggaggaggatgttaaggcccga
gctgccgcggggctccagtccgctctcgccgctctcagcgtcaatgccaagccatttatc
ccgaatgtcgacgcggcggtgtttgtgccgactttccttcaaagtagccctacggaaatc
tccaattcctatggtcacggtgctgagccagttgccagcatggaggttttagaaacagtt
gctccggtggagaacggaggagggacagaagcagacatggcggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccagggggaggaggagcactgggaggagag
ggaggttccagtgaagaggcacagggaagggaggaagtagagatgatggaggaggaagaa
gaggaggagttgcccgtgctaaaagtaatcccgctcccaccaaatgccccgaagaaggag
catgtcaatgtggtgttcatcggtcatgtggatgctggtaaatcaacaattgggggacag
atcatgtatttgacaggtatggtggagaaaagaaccctggagaaatatgaaagagaagca
aaagaaaaaaacagagaaacatggtacctgtcctgggccctggacactaaccaggaggag
agagacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcac
tttactatcctggatgcccccggccacaaaagctttgtccccaacatgattggtggtgca
tcacaggctgacttggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaagggaggccagacgcgagagcacgccatgctagccaagacggctggagtcaag
cacctcatcatcctcgtcaacaagatggatgaccccaccgtcaactggagcttggaaagg
tatgaggaatgtaaagagaaattagtgccatttctgaagaaggtgggcttcaatccaaag
aaggacatctacttcatgccttgctctgggctaacgggagccaacttgaaggaccccata
gaggagtgcacgtggtacacggggttgccattcatcccacacctagacagcctgccaagc
ttcaacagaatcacagacggccccgtcagattacccatcgtagacaaatacaaggatatg
ggcacggtgatcctggggaagctggagtctggctccattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgatgaggtggagaca
gatgaagctgttcctggggagaacctgaagctaaggctgaagggcatcgaggaagaggag
attctgcctggcttcatcctctgtaacgctgagaacctctgccactccggacgcaccttt
gatgcccagatcgtcatcattgagcataaatccataatctgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatttgtctagtggac
aagaagacaggtgagaagagcaagacacgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggcttcggtgtgccggaaccatctgcctggagaccttcaaagacttcccacag
atggggaggttcacccttcgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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