Oncorhynchus kisutch (coho salmon): 109870048
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Entry
109870048 CDS
T09179
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain isoform X1
KO
K09441
GA-binding protein transcription factor, alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109870048 (gabpa)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
109870048 (gabpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109870048
NCBI-ProteinID:
XP_020315956
Ensembl:
ENSOKIG00005030604
LinkDB
All DBs
Position
LG2:complement(64452138..64461682)
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AA seq
440 aa
AA seq
DB search
MSKSETEEMIEIEIDGQEKQECLEEGVEEQTITSADLIQQDIDINEPIGNLKKLLEPRIQ
MSLDGYEICLQDIQLHPDHSLFDQGVKTDGTVQLSLQIITKPGEEKLNILEIVKPVETVE
VVIDPDAAGEEGTLMEEGQLIAVEHSSLSDDTSEQVTRWAAALEGYRKEQVRLGIPYDPE
QWTADQVIHWAVWVMKEFSIDEMEVGGIHIPGHDLCSFTQEEFLQRVPSGEILWSHLELL
RKYVLASQDQSGQEATVTIDQQVQIIPAAVQTTPTTIKVLKQNRGPRTPRISGGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKKLARIQ
LHGIGQPITTVTLATSAQDS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagtgagacagaggagatgatagagattgagatcgacggacaggagaaacag
gagtgcctggaggagggggttgaggagcagaccattacatcagccgatctgatccaacag
gacatcgacatcaatgagccaatcggtaacctgaagaagctcctggagccccgtatccag
atgtcattggatggatatgaaatctgtctacaggacatccagctgcatccagaccacagc
ctctttgatcaaggagtgaagacagacggcacagtgcaactcagtctacagatcatcaca
aagccaggcgaggagaagctgaacatcctggagatcgtgaaaccggtggagacggtggag
gtggtgattgacccggatgcggcaggggaggagggcaccctgatggaggagggccagctg
attgctgtggagcactcctccctgtcagatgacacctcggagcaggtgacacgctgggcc
gccgccctggagggctaccgcaaggaacaggtccgtctggggataccctacgacccagaa
cagtggacggcggaccaggtgatccactgggccgtgtgggtgatgaaggagttcagcatt
gacgagatggaggtgggagggattcacatcccgggtcacgacctctgctccttcacccag
gaagagttcctgcagagggtccccagtggagagatcctttggagccacttagagctgctc
cgcaagtatgtgttggccagtcaggaccagtctggccaggaggccacagtcaccattgac
caacaagtccagatcatcccagctgccgtgcagaccacacccaccactatcaaggtactg
aagcagaaccgcggccccagaacaccccgcatctcaggaggagaggagcgcagctcacct
ggcaaccgcacaggtaacaacggtcagatccagctgtggcagttcctgttggagctgttg
acggataaggatgctagagactgtatctcctgggtgggagaggagggagagtttaaactc
aaccagcctgaactggtggcccagaaatggggccaacgcaagaacaagcccaccatgaac
tatgagaaactcagccgagcgctgaggtattactacgacggggacatgatcagcaaggtg
cagggcaagcgcttcgtctacaagtttgtgtgtgacctgaggactttgattggctacagc
gctgctgagctcaacaacctggtgactgagtgtgagcagaagaagctggcccgcattcag
ctgcacgggattggccagcccatcaccacggtgacactggccacctcagcacaggacagc
tga
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