Oncorhynchus kisutch (coho salmon): 109870071
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Entry
109870071 CDS
T09179
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109870071
04121 Ubiquitin system [BR:
oki04121
]
109870071
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109870071
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109870071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
zf-BED
ZBED1_RNase-like_helical
DBD_Tnp_Hermes
DUF8247
DUF3791
Motif
Other DBs
NCBI-GeneID:
109870071
NCBI-ProteinID:
XP_020315982
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Position
LG25:complement(21735267..21738252)
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AA seq
599 aa
AA seq
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MSKRSVVWQHFIVVMDDAKKVECKLCKQRFAYHSSTTNMTYHLKTAHPQYSTSASTASSG
LTQTTLDQNSPISEKRKREITEGIVDFIALDMRPVNLIEGVGFKDMMKILEPGYTVPKRE
TVMQALTAKYETTKEKVLESIKNSQAVSFTTDMWTSLRMESYMTVTAHFITEAWGLQCLV
LETKQMEENHTAATIAQRLGEVADKYEIPGCKRVAVVHDNAANMILCADILGREEKWAGV
KGIRCAGHTLQLCINATLNQDHICRTVVAARLLVAHFKKRTKARKGLKEKQKEQKVVEHV
LIQDVSMRWNSSQTMLARLIEQRWPVTAVLSDPNYTGENERNLDLTPAQWNMAEDISNVL
KPIVTLTELQSEEENASLSATIPMLANLKRRHLAPVEDDSPTTKSLKTRLVEESDNRWQL
KDRLFESSIYVQAAVVDPRFKLLSFLDDAKRDVAYINVSQLADRLSAEGDRDSSTPTDKE
VPAPKRKKTDKEREIDMLMCGDEREKEFPGDSKKEVKYYLQDRTKVDAGPLAWWGKNEDR
YPRLARAAKYLLSIPATSTPSERIFSKAGFIFNKTRSCLLPENVDKLVFLSHNLKRLGK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggtctgtagtatggcagcatttcattgtagtaatggatgatgccaaaaaa
gtggaatgcaaactctgcaaacagcggtttgcttaccatagttcgacaacgaatatgaca
tatcacttgaaaacagcgcatccccagtacagcacgagcgcctccactgctagctcaggt
ttaacccaaaccaccttggaccagaattccccaatctcagaaaaaagaaagagagagata
actgagggtatcgtggacttcattgccttggacatgaggcccgttaacctgatagaaggc
gtgggatttaaggatatgatgaaaatcttggagcctggttacactgttcccaagagagag
actgttatgcaagctctgacagcgaaatatgagaccacaaaagagaaggttttggagtct
atcaaaaacagccaggcagtaagttttacaaccgacatgtggacctcactgaggatggag
tcatacatgaccgtaactgcccatttcattacggaggcctggggactgcagtgtcttgtg
ctggagacaaagcaaatggaggagaatcacaccgccgccaccattgcgcagagacttgga
gaagtggccgacaaatacgaaatcccaggatgtaaaagggtcgctgtggtacacgacaac
gccgcaaatatgattttgtgtgcagatatactggggcgggaggagaaatgggcaggtgtt
aaaggaatcagatgtgctggacacaccttacagctgtgcatcaacgccactctcaatcaa
gaccacatctgtcgcactgtggttgcagccagactccttgtggctcattttaagaagcga
acaaaagccagaaagggactaaaggagaaacaaaaagaacaaaaggtggttgaacatgtc
ctgatccaagacgtttccatgcggtggaattcttctcagaccatgttagcgcgtctgata
gaacagagatggcctgtaacagcagtgctctccgaccccaactacactggagaaaatgaa
cgcaaccttgatctcaccccagcgcaatggaacatggcagaggacatttcaaatgtgctg
aagcccattgtcaccctgactgagctgcagtccgaggaggaaaatgcatccttatctgca
accatacccatgctggccaacctcaaacgccgtcacttggcaccagtggaggacgacagc
cccaccactaagagtcttaaaacaaggctggtggaggaatctgacaacagatggcagctc
aaagaccgactatttgagagtagcatatacgtccaggcagcagtcgtagacccccgcttc
aagctgctttcgttccttgacgatgcaaaacgggacgtagcctacatcaacgtgtcccag
ctggccgaccggttgagcgctgagggagaccgagacagctctacacccacggataaagag
gtacccgcaccaaaaagaaaaaaaacagataaggagcgggagattgatatgctaatgtgt
ggagatgagcgagagaaagagtttccgggggatagcaaaaaagaagttaagtattatctc
caagatagaacgaaagtcgacgctggaccactagcttggtgggggaaaaatgaggacagg
tatccgaggctggccagagcagcgaaatacctcctctcgattccggcgacctctactcca
tcagagcggatattttccaaggcagggtttatattcaataaaacgaggagctgccttctg
cccgaaaatgttgacaagctggtgttcctgtcgcataacttgaaaagattggggaagtag
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