Oncorhynchus kisutch (coho salmon): 109870091
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Entry
109870091 CDS
T09179
Name
(RefSeq) muscular LMNA-interacting protein isoform X1
KO
K27832
muscular LMNA-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109870091
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
109870091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MLIP
Motif
Other DBs
NCBI-GeneID:
109870091
NCBI-ProteinID:
XP_020316015
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All DBs
Position
LG25:complement(33304250..33348941)
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AA seq
1083 aa
AA seq
DB search
MDLCNPESISPLPGHKQCLDVEKSDSSNESQGKVSEEEVSSKLLFYTFVPVLKTLPIKIT
LTEAVKTGLLTGKPNKNLGVPKQKVTEHTMSDGGLFKAEVIYISDCEKRGAGDMVQQETY
TRLISPPDHTTPPQTPPPVNTQPENTVHHFVSGPATMETAVNKHQDISQPQWHNTPVGAE
VSLDLFLNRESDSDERLSPANSTDLFPASSKSQSQESILSESWDKDRSWSALQMSPETSC
AVSPCSSVRSGMFTPSVVRVKRHSLEPGSSLVHMPPTCLSPTYCASPSSSPCPLSPRSRH
RPPPTRLSLLTAILRKGRLPVLSPTLTLQRPYSPCWPIHHGTSCNACSAASSVASIPLEV
FSSRAQSSASIHSPAQSYHHRDGCVLESLRSVNAPLSIESKELSTSWRMVGPHSPPLRHS
EKLKSNNGIISERVTSPSYRSLVASPVPPLSQAFPQNLPKPVDHTKVPSPPLYSSHSRFR
RLFPEPLDNSVNSRLNSLLPEPKPVKNQGASVPQDSNQPLYSSHSRLKCLSPNPAHNQGT
SACQPLYSSFSKLSSSPPGIVNSSSNSTLDSLSPRPVNTSSNSTLDTLSAEPKPVSKNFV
QALNSHLQSKLTFLSSAPANNQETFKALDTSTPEVSSMGTSNNRGISMGTLNTRGTARPQ
VWSPLPYSCLSRSPKPLSLSCCAPEGHLSASSHSPSGIVSSAQRYTDTISPTPLQNGLKT
PPHSMLQLGVSPAHRAFHLTPTLYTPPGCPSPKPPTPPSTPDRFTLSPSPAPPTRDLTPS
PSLSLRSTPSPCLWREMSDSIDTKRKPHKIKLSYKALAAIPTNIVLLDQQAIDDQVHKEG
DSQDPVDRHKKEDTHAEMCSPAQLRKQSEDLYAVIDEVLEDPIPMRQASPALAYSRESMD
KCAPKRYTSLPRSLGRETKYATFNLQRSVERKLADTYKTKPGVIRPANIIPRLPEENYDE
AFHPNPFKQYLDELTVNDQNKSTHPFVTIHENEALMSKKLDNTLLGKMRADGSISSGNLA
LNTEKNSENNSTTEEEDNIIISSLLITESEEPKANPAKDGSWQGGATSFNLTKVKMEAFE
THI
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggacctctgtaaccctgagagcatttcacctttacctggacataaacaatgcctagat
gtggagaagagtgacagctcaaatgagagccagggaaaggtctcagaagaagaagtgtca
tccaagcttcttttttatacgtttgtgccggtgctgaagacattgccaattaaaatcaca
ctcacagaggctgtgaaaacaggactactcacaggcaaaccaaataagaatttaggagtt
cccaagcagaaggtgactgaacacaccatgtcggacggagggcttttcaaggcggaggtg
atctatatcagtgactgtgaaaaacgtggagcaggggacatggtccaacaggagacatat
actcggttgatatctcctcctgatcacacaaccccaccccagacccctccccctgtaaat
acccagccagaaaatacagtccaccattttgtatccgggcccgctactatggaaacagct
gttaacaaacaccaggacatttctcagccgcagtggcacaacacccctgtgggtgctgag
gtcagcttggatctctttttaaatagagagtctgactcagacgagagactaagccccgct
aactccacagacctgtttcctgcttcttccaagagtcagagtcaggagtccatcctctct
gagagttgggacaaagacaggagctggtcagcactgcaaatgtcccctgagacgtcttgc
gcggtgtccccgtgctcctcagtgagatctggcatgttcaccccctctgttgtgcgagtc
aagaggcactccctagaacctggctccagtttagtccacatgccgccaacctgcctctca
ccaacttattgtgcaagtccctcctcgtccccctgtcccctgtccccccgctcccgccac
aggccccctcccacgcgactctccctgctaacagctatcctccgaaagggccgcctgcca
gtcctgtcccctactctgactctacagagaccctactccccctgctggcccattcaccat
gggacttcctgtaacgcctgctctgcagcctccagtgtggcctctattcctctggaggtg
ttctcatccagggcccagtcctcagcctccatacacagcccagctcagagttaccatcac
agggatggatgtgtgttagagtcccttagatctgtcaatgcacccctgtccatagagtct
aaggagctttccacctcatggagaatggttggccctcacagcccaccattaagacactca
gaaaaactgaaatcaaacaatggaattatctctgagagggtcacctccccctcttatcga
agccttgtggcgtcaccagttccaccgttgtctcaagcgttccctcagaacctccccaaa
ccagtagaccacaccaaagttccaagtccacctctgtactcatcacactcacgattcaga
cgtctgtttcctgagccactcgacaactcagttaactcaagacttaactctctgttgcct
gagccgaaaccagttaagaaccagggggcttctgtgccccaagattcaaatcaacccctg
tattcgtcacactcaagacttaaatgtctgtctcctaatccagctcacaaccaggggacc
tctgcatgtcaacctctttactcatccttctcaaagctcagctcatcgcctcccggaata
gtaaactcctcatcaaactcaacactcgactcactgtctcccagaccagtaaacacctct
tcaaactcaacacttgacacactgtctgctgaacctaaaccagttagcaagaactttgta
caagctctgaattctcacctacaatcaaagctcacctttctgtcttctgcacctgctaat
aaccaggagacctttaaggccctcgatacgtctacacctgaagtttcctccatgggaacc
tcgaacaatcgggggatttctatggggacccttaacacacgggggaccgcaaggccccaa
gtttggagtccactgccctactcatgtctttccaggtctcctaaacctctctctctctcc
tgctgtgccccagagggccatctttctgcctcatcccactcacccagtggcatagtttcc
tctgcacagaggtacacagatacaatatcaccaaccccattacagaacggcctgaaaaca
cctccacactcgatgctgcaactcggtgtctccccagctcacagagctttccacctcact
cccaccctctacacacccccaggatgtccatcccctaagccccccactcccccctctaca
cccgaccgtttcaccctctccccttctccggcgcccccgacccgcgaccttactccgtct
ccctctctctccctgcgctctacgccctctccatgcctatggagggagatgtcagactcc
attgatacaaaaagaaagccacacaagatcaagttaagctataaagccctcgctgcaatt
cccacaaacatcgttctgttggaccagcaggcaattgatgatcaagtgcacaaagaagga
gattcacaggacccagtggacagacataagaaagaggacacacatgcagagatgtgttcc
cctgcacagttgcgaaagcagtcagaagatctgtacgctgtcattgacgaagtgttagag
gaccccattccaatgcgccaagcatctcccgctctcgcatactccagggaatcaatggac
aaatgtgcaccaaagcgatacacctcattgccaaggtcattgggacgtgaaacgaaatat
gcaaccttcaacctacaacggtctgttgagagaaaactggcagacacctataagaccaag
cctggcgtaattcgacctgccaatattatcccaagattgccagaggaaaattatgatgaa
gcgtttcatccaaaccccttcaagcaatatctggacgagttgactgtcaatgaccagaac
aagtctactcacccgtttgtgacaatccatgagaatgaggcgctgatgtccaaaaagctt
gataacacacttttgggaaagatgagggcagatggcagcataagctctggcaacctggcc
ttgaacacagagaagaacagtgagaataactcaacaacagaagaggaagacaacatcata
atctcctcactgctgattactgaatctgaggagccgaaagctaaccctgcaaaagatgga
tcctggcaaggtggtgcgacctctttcaaccttaccaaggtaaagatggaagcctttgag
acacacatttaa
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integrated database retrieval system
