Oncorhynchus kisutch (coho salmon): 109870117
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Entry
109870117 CDS
T09179
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109870117 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109870117 (abcb10)
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
109870117 (abcb10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
nSTAND1
AAA_33
RsgA_GTPase
AAA_5
P-loop_TraG
NB-ARC
Motif
Other DBs
NCBI-GeneID:
109870117
NCBI-ProteinID:
XP_020316058
Ensembl:
ENSOKIG00005009304
LinkDB
All DBs
Position
LG25:complement(25898875..25905831)
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSRVHKLFWLECHTSRGQREVSGKRFEPVARSSLSHPRR
CNSLVPCVPLRQFTIPPHLLRNSWTATVHFANYSSSTDSKQATQQEVDSNDLQSTETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAIAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRIDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactcccgtgtacataaactattttggttagaatgccatacgtccaggggacaacga
gaggtgagtgggaaaaggttcgaacctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgccctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaactcatggacagcaactgtacactttgccaactacagctcttcgacagactcaaaa
caagcaacacaacaagaagttgacagcaatgatctgcagtcaacggaaacaaaacaatcc
ccaactcggatacccactgaggatgtcaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggcg
cccttcttcctgggccaagtcattgacaccatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggcgccgct
aatgctgcccgtgtctacctcatgcaaatctcaggtcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacagac
aacctttctgacgggctccgcgctatcgcccaggcaacagctggggtcagcatgatgttt
tacgtgtcaccaagtttagcagcctttgtgctactgattgtgcctcctatggctggccta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcggaagaacgcatcagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccaccttgcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctcattctactctgaactgatgaagggctttggcgcaggggcacggctttgggagcta
ctggacaggaagcctgagttccccctcaatgagggtattgtactgaggccggagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcatagacgccccc
atcttccaggacctaagtctctctgtgcctgctggctccgtcatggccgtggtagggccc
agcggatcgggcaaatccactctggtctccctgctgcttaggctctacgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcctgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccgagctgcacag
atcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaatcccaagatacttctacttgatgaggctacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatgggcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctggaccagcggcgt
gtggtggagtgtgggcagcacgcacagctcctgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagccttccttcaagaggggcaaaagcaagcattgcgttga
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