Oncorhynchus kisutch (coho salmon): 109870190
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Entry
109870190 CDS
T09179
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109870190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109870190
03036 Chromosome and associated proteins [BR:
oki03036
]
109870190
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
109870190
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109870190
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
109870190
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109870190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
Teflon_C
SET
zf-C2H2_6
zf-H2C2_5
zf-C2H2_2
zf-C2H2_ZN142
ZNF428
zf-C2H2_ATbp_3rd
TRASH_HVO_1752_C
zf_C2H2_ZHX
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
109870190
NCBI-ProteinID:
XP_020316180
Ensembl:
ENSOKIG00005007258
LinkDB
All DBs
Position
LG25:25038625..25043404
Genome browser
AA seq
973 aa
AA seq
DB search
MITKIISNYRFQEDQVVQSTVMSEEVIVVEWADPGVSEEGCQVQIITDNHSAVFSDSLVQ
NILVNTVVQGQEEGHQLLDDNGNDLYCEECHTSNKDQCDVQGGLSFMLDSPTPMGIPQRA
LLTLPHGLVVGRSSIPGAGLGVLNQGPAVAPGMHFGPCEGEVTTRERAVASDYSWEVWNS
KSESEYIDAARDTHSNWMRYVNCARNEEEGNLIALQYRGIVFFHCCRSIPPGDEFLFWPG
GRFIERFRDPSDQIWLRKCTPSEFRTDLSSQVFLCCQCQLTFTTKSYLQKHTEKSHSLDL
SPASELSELDNHLSNGNVKADPMSSSSVGELAYRCPQCPKSFKQKGHVQRHMRNVHSKVK
PYCCIHCRRCFAQLSCLARHQIRVHGKKKKQEIEEFMSEEVRGKSQPSPDRTQETESSTS
DAPPTGTSVLFPCPHCPFSSTVESSLCQHMKSHDQREKVIKMQAFVEVRGESTHKPESPE
LPSDALHTEPQTDEPAQRGEEANSCSQCGKRFKQKGHFQRHMRAVHSNVRPYCCPQCRKC
FAQGYDLARHQLRVHGTKKKRRVVEVRGANLPRPPSDSAWEPEPPSTNDSTTETQTGRAP
SQRLRNLRVKSTRSSKAKTKTNAPKQRQISTKKRSHSDPDSDALDMEEKEMEGEAVGEEA
QYSCTECQGTYDNPESLRSHQCIQVVVGPPPYSCSTCGVTFKRYTTLKKHKLNKHPKENL
RYCCTRCGRFFSQAASLQRHLEAEVCKDIQLSSEAVPCSYCQFSFTEERYLRKHVKRHHP
EEYVSQASGLGSGLIPPEQKAVEGGEVHLCFQCGKSYKYVKCFKSHRCFQSVTAKRYLCN
DCGKGFSCFYSLKQHQRIHTGEKPYRCSYCEKCFSHSGQLNVHVRIHTGEKPFLCTECGE
TFRQSGDLKRHERKHTGVKPCTCPECGKSFSRPQSLKAHQLLHNGEKLYKCDQCVKRFSR
NYHLTRHHEKMHS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgataacgaagattattagtaattacaggtttcaagaagatcaggttgtccagtctaca
gtgatgtctgaagaagtgatcgtcgtggagtgggcagatcctggtgtgtcagaggaggga
tgccaagtccaaatcattacagacaaccactctgcagtgttctctgacagcttggtccag
aatatattggtgaacactgtggtacaaggccaagaggagggtcatcaactactagatgac
aacggtaatgacctctattgtgaggagtgtcatacctccaacaaagaccagtgtgatgtc
caaggtggtctgtccttcatgctggactctcccactccaatgggtataccccagagggcc
ctcctcaccctaccccatgggctggtggtaggcaggtccagtatcccaggggcaggcctg
ggggtcctaaaccaagggccagctgtggcaccaggaatgcactttggcccctgtgagggg
gaggtgactaccagggaaagagcagtagcaagtgactattcctgggaggtctggaacagt
aagagtgaatctgagtacatcgatgctgcacgagacactcattccaactggatgaggtat
gttaactgtgctcgtaatgaagaggagggtaatctcatagcactccagtacagggggatt
gttttcttccactgctgccgctccatccccccaggagatgagttcctgttttggcctggg
ggcagattcatcgaaaggtttagggacccctctgaccaaatctggctccgaaagtgcacc
ccttcagagtttagaacagatttgtcgtctcaggttttcctctgctgtcagtgccagctt
actttcaccaccaagtcctaccttcaaaaacatacagagaaatcacactctctggaccta
tcacctgcgtctgaactgagtgagcttgacaatcacctttctaacggcaatgtaaaggca
gacccgatgtcgtcgtcctctgtaggggagttggcctaccggtgccctcagtgtcctaag
agctttaagcagaagggccacgtccagagacacatgcgaaatgtccactccaaggtgaaa
ccgtactgctgcatccattgtaggaggtgtttcgctcagctgtcttgtctggccagacac
cagatacgagttcatggaaagaagaagaagcaggaaatagaagagtttatgtctgaagag
gtcagagggaagagtcagccatcccctgacaggacccaggaaacagagtcctccacctcc
gatgctccacctacagggacctctgtcttattcccgtgtcctcactgcccattctcttct
actgtggaaagcagcctttgtcagcacatgaagagccatgaccaaagggaaaaggtcatc
aaaatgcaggcttttgtagaggtcagaggagagagcacccataaacctgaatccccagaa
ctcccctctgatgctctacatacagagccccagacagatgagccggcacaaagaggtgag
gaggccaacagctgctctcagtgtgggaagcgctttaaacagaagggccactttcaaaga
cacatgcgagctgtccactccaacgtcagaccctactgctgcccccagtgcaggaagtgt
tttgctcaggggtatgacctggcgaggcaccagctacgagttcacggaacgaagaagaag
cgtcgagtagtagaggtcagaggggcgaatctgccccggccgccctctgacagcgcctgg
gaaccggagcccccctccaccaatgattcaactacagagacccagactggaagagctccc
tctcagagactaaggaacctcagagtaaagtccaccaggtcctctaaagccaaaactaag
acaaacgcaccaaaacaaagacaaatcagtaccaagaagagatcgcattcagatcctgat
tcagatgctctggacatggaggagaaggagatggagggagaggctgttggagaggaggcc
cagtacagctgcactgagtgtcagggaacctacgacaacccagagtctctcagatcccat
cagtgcatccaggtcgtggtggggccgccgccgtattcttgctctacatgtggggttacc
ttcaaacggtacaccaccctgaagaagcacaagctcaacaagcacccgaaggaaaatctg
cgttattgctgcacccgctgtggaaggttcttcagtcaggctgccagtctacagcgccac
ctggaggcagaagtatgtaaggacatccagctgagctctgaagctgtcccctgctcctac
tgccaattctccttcaccgaggagaggtacctccggaagcacgttaagagacaccaccct
gaggagtatgtctctcaagcctcaggcctgggctcaggcctcattccgccagagcagaag
gccgtggaggggggagaggtccacctctgctttcagtgtgggaagagctacaagtatgtc
aaatgcttcaaatctcacaggtgtttccagtcagtcacagccaaacggtacttgtgcaat
gactgtgggaaaggtttctcttgtttctacagccttaagcagcatcagcggattcacacg
ggagagaagccataccgctgttcttattgcgagaagtgttttagccactctggacagctg
aatgtgcacgtgaggatacacacaggggagaagcctttcctgtgtacagagtgtggagag
accttccgtcagtctggggatctgaagcgtcatgagagaaaacacactggggtgaaacca
tgtacctgtcctgaatgtgggaaaagcttcagtcgacctcagagtctgaaagctcaccag
ctgctgcacaacggagagaaactgtacaagtgtgatcagtgtgtcaaaaggttttcacga
aattatcacctgacgagacaccatgaaaagatgcactcataa
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