Oncorhynchus kisutch (coho salmon): 109870294
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Entry
109870294 CDS
T09179
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
oki
Oncorhynchus kisutch (coho salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
S1_RRP5
PSD5
Anophelin
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
109870294
NCBI-ProteinID:
XP_031660772
Ensembl:
ENSOKIG00005017709
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All DBs
Position
LG25:complement(27828015..27913797)
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AA seq
1018 aa
AA seq
DB search
MQRRTRTVKVYTEKTTDGDSDELSPHTQSASEDEIEEWQPESKAPKRQQKAQPSEKKPVV
KRQAKPKEPKESKPKAPRKPVERKPRAPRAPKAPRAPKAPKPPKAPKPPKEPKPPKVPRA
TKGGKKQQALLEEEAGGAICDAAESQQSARVKEERLSFIVPDGSCNDNMSRAGGGWSEGP
SSSHQPYGGKKEEPEEDFAFDEPSLKRQKTSSAPQGRPTRLPTSGRGFGEDLNMNWDLIQ
LLSERTGVEQRLCLNISQLFREENTIPFIVRYRKELINHMDADAVRDVQLVLEEIYALAK
KTQTISQTLKKEGVLTAELEQALRNCRTADELDHVYAPYKKGSRLSKACRAKQLGLESAA
QALLQSPHTLDLRAWVKPGREGLSTLEEVSTGVEQILADIIAKDGETLTHIRSLCDKSKV
MLQSSVSRTALKEQQKEGHQRKPKDIDKFHLYCDFTCNMQHIQHHQTLAINRGENLKILT
VKVNIPDRVKSDFCRWCLNVRWRPKGYPREELMKILQDAVEDSYKRLLIPLLSRSYRTKL
TVSAEKESIAMFVRNLRQRLLVCPVRGRVIMGVDPGFRHGCKLAVLSPTSQILFTDVVYL
HGSGGNREADKLRHLMIRYSCNTVVIGNGTACRETEAFFADLISRRFFQPLDVSYCITSE
AGASIYSVSPAAVKEMPDLDPNLRSAVSIGRRVQDPLAELVKIDPKHIGIGTYQHDVSQS
SLKAALDGVVQECVSFVGVDINICSETLMRHVAGLNTGRAKSIAEWRETNGPFMNRDQLR
LVKGMGPKSYQQCAGFIRINPLDHLNNHSDAAGGNSAQAAQEKPAAKGKGKTKASAAVPT
LPNPLDQTCIHPESYAVARSFLSLVGGSVDQMGRPELRQCVEASVKCQGLEALAETLNTT
PDTLQLIIDGLTQPPGFDIRQDFEKADFKRGIVSMSDLREGVVLTGRVENATLFGAFVDI
GVGRNGLIHKKYITPDKLPADQRRRSLALGPGEKVEVRVLNVDPQRGRIGLDLIRVLR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggcgaactcgcacagttaaagtctacacggaaaagacaacagatggagattcc
gatgaacttagtccacacactcagtcagcgagtgaagatgagattgaagaatggcagcca
gaatccaaggcccccaagaggcagcagaaagctcagccaagcgagaagaaaccagtggtg
aagaggcaggctaaacctaaagagcccaaggaatccaaacccaaagccccacgcaaacca
gtggagaggaagccccgagctcccagagcccctaaagctcccagagcccctaaagctccc
aaaccccctaaagctcccaaaccccctaaagaacccaaaccccctaaagttcccagagca
acaaaaggaggtaaaaaacagcaagctctgttagaggaagaggctggaggagccatctgt
gatgcagcggagtcacagcagtcagccagggtcaaagaggagagactgtccttcattgtg
cctgatggatcctgcaacgacaacatgtccagagcagggggcgggtggtccgaggggcct
tcctccagccatcagccttatggggggaaaaaggaagagcctgaggaggactttgcgttt
gatgagccttctctgaagagacagaagaccagcagtgccccccagggcaggcccaccaga
ctgcccacctcaggaagaggctttggagaagacctgaacatgaactgggaccttattcaa
ttgctgtctgagaggacaggagtggagcagaggttgtgtttgaacatttcccagctcttc
agagaggagaacaccattccctttatagtgcgctacaggaaagagttgatcaaccacatg
gacgcagatgccgtgagggatgtgcaactggtgctggaggagatctatgcactggcgaag
aagacgcagactatcagtcagactcttaagaaggagggagtcctgactgctgagctggaa
caggctctgaggaactgcaggaccgctgatgaactggaccacgtgtatgcaccctacaag
aaaggcagcaggctgagcaaggcctgtcgtgccaagcagctgggactggagtctgctgcc
caggccctgctacagagtcctcacactctggacctgagagcctgggtcaaacctgggagg
gaaggattgtccaccttggaggaggtgtcgaccggtgtggagcagattttggctgatatt
attgctaaagacggagagactctgacccatataagatcgctatgtgataaaagcaaggtg
atgctccagtcgtctgtgtctaggacagccctgaaggagcagcagaaagagggtcaccaa
agaaagcccaaagacattgacaagttccacctgtactgtgacttcacctgcaacatgcag
catattcaacaccaccagaccctggccattaaccgaggggagaatctgaagattctgaca
gtgaaggtcaacatccctgacagggtgaagagcgacttctgtaggtggtgtctcaacgtc
agatggagacccaagggttaccctagagaggagctgatgaagatcttacaagacgcagtg
gaggactcgtacaaaagactcttaattcccctgctcagcagaagctacaggacgaagctg
acggttagtgcggagaaggagtccatagccatgtttgtgcgcaacttgcgccagcgtctg
ttggtgtgtcctgtgagaggccgtgtcatcatgggcgtggacccagggttcagacacggc
tgtaaactggccgtcctctcccctaccagtcagatattattcacagatgtggtgtacctc
catggttcaggggggaacagagaggcagacaaactgcgccatctgatgatcagatacagc
tgtaacacggtggttatcggcaacggcacagcctgtcgagagactgaggccttctttgct
gacctcatcagccgacgcttcttccagcctctggacgtgtcatactgcatcaccagcgag
gcaggggcatccatctacagtgtgagcccagcggcagtgaaagaaatgcctgatctggac
ccgaacctgaggagtgcagtgtccatagggagacgagttcaggacccgctggctgagctg
gtgaagattgacccgaaacacatcggcattggaacctaccagcacgatgtgtcccagagc
tctctgaaggcagccctggacggggtggtgcaggagtgtgtgagcttcgtgggagtggac
atcaacatctgctcagagaccctgatgagacacgtggcaggtctgaatacagggcgtgca
aagagcatagcagagtggagggagacgaacgggcccttcatgaacagagatcagctgaga
ctggtgaagggcatgggccctaagagctaccagcaatgtgccggcttcatcagaatcaac
cctctagaccatctcaacaaccacagtgatgcagcagggggtaactcagcccaagcagcc
caggagaagcctgcagccaaggggaagggaaagaccaaagcctcagctgctgtacctacc
ctgcccaaccctctggaccagacctgcatccacccagagtcctacgctgtggccaggagt
ttcctgtccctggtagggggtagtgtggaccagatgggccggccagagctcagacagtgt
gtggaggccagtgtgaaatgtcaaggtctagaagccctggctgaaaccctcaacaccacc
ccagacacactgcagctcatcatagacggactcacccagcctcctggctttgacatccgc
caagacttcgagaaggcagacttcaagcgtggcattgtgtctatgagtgacctgagagag
ggggtggttctgacgggccgggtggaaaacgccactctgttcggggccttcgtggacatc
ggagtgggccgcaatgggctgatccataagaagtacatcaccccagacaagctgccagct
gaccagaggaggcgcagcctagccctaggccccggggagaaggtggaggtcagggtgctc
aacgtggaccctcagcggggccgcattggactggacctcatacgggtcctcagatag
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