Oncorhynchus kisutch (coho salmon): 109870376
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Entry
109870376 CDS
T09179
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X2
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
oki03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109870376 (ercc4)
03460 Fanconi anemia pathway
109870376 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109870376 (ercc4)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109870376 (ercc4)
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109870376 (ercc4)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
109870376 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
109870376
NCBI-ProteinID:
XP_020316454
Ensembl:
ENSOKIG00005007341
UniProt:
A0A8C7D7Q3
LinkDB
All DBs
Position
LG25:21144872..21151888
Genome browser
AA seq
914 aa
AA seq
DB search
MYARVVIFLQLMICSRRREMAGQLLEFETEMFLSLFGSDGLLVTAEGMGIDRILLQFMRV
YSEEGSLVLLLNTTTPEQEFFTEQLRAEGVSHLPRTVTSDVQSTERYEVYTKGGVLFVTS
RILVVDFLTDRIPAHLISGILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSF
SSGFCQVERVMRNLFVKKLFLWPRFQASVNSVLDRHKPEVVELHVSLTPAMRAIQSSVLD
IMNACLKELKRYNPTLEAEDLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKSLVQDLKIL
RTLLLYLTQYDCVTFLNLLESLRSSQKNFGSNSGWLFLDSSTSMFINARSRVYCIPESRK
KLKVGADTEKQQSTSEVKRVLVLEQNPKWEALTEVLQEIEKENKSSELKPGHILICASDD
RTCAQLHEYISRGSDSLLNRLYARTIGKRDALFDPDAHKQQGQSWARKQQPEKETKGKKA
KGKAGTRTNSKSKKRPSLTLTQMVGNREGDEGEVMGSSGDEGGLLEKEEEELKLDLSSDA
YYGVLKEPLTVIHPLRGCTDPYSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKASRPGKP
LRVYFLIYGGSTEEQRYLTGLAKEKQAFEHLIREKATMVVPEEREGREDTNLDLSRSQEP
AYSTTNTRKAGGQEQPKEPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTADT
CVERKSVSDLIGSLQSGRLYTQCLSMTRYYRKPVLLIEFDSAKPFSLVARTDFRQEISAN
DVTSKLTLLTLHFPRLRILWCPSPHATAELFQELKKGRPEPDAAAAQAITAESDTVAESA
DLFNPGPYDFLLRMPGVNAKNYRALVKHADSLAHLAKLSQERLAQILGHAGNGKSLYEFL
HNTVDIPAPAQKSK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcacgtgtggttattttcttacaactgatgatatgcagtagacggagggagatg
gctggtcaactacttgaatttgagacggagatgttcctgagtttgtttggctcggacggg
ctgctggtgactgcggaaggcatggggatagaccgcatcctgctgcagttcatgcgggtg
tactccgaggaggggagtctggtgctgctgctgaacactaccacgcccgagcaggagttc
ttcacagagcagctgcgagctgagggagtgagccacctgccccggacagtaaccagtgat
gttcagagtacagagcgctacgaagtttatacaaagggaggggtcctgtttgtcaccagc
cgtatcctagtggtggacttcctcactgacaggatacctgcacacctcatctcgggtata
ctggtgtaccgggctcataagataattgagtcttgccaggaagccttcatcttgagactg
ttcagacagaagaataagacaggcttcattaaggccttcacagacaaggccacatccttc
tcctcaggcttctgtcaggtggagagagtcatgaggaacctctttgtcaagaaacttttc
ctctggcccaggttccaggcgtcagtgaactcggttttggacagacacaagccagaggtg
gtggagctgcatgtgtctctgaccccggccatgagggccatccagagctctgtcctggac
atcatgaacgcctgtctgaaggagctgaagcgctacaaccccacgctggaggcagaggac
ctctccctggagaatacccttgggaatgcctttgaaaagaccatccgtcactacctggac
cctctgtggcaccagctgggagccaagaccaagtctttggtccaggacctgaagatctta
cgtaccctgctgctctacctcacccagtacgactgtgtcaccttcctcaacctcctcgag
tcactccgctccagccagaaaaactttggaagcaactctgggtggttgttcctggactcc
agcacctccatgtttattaacgccaggagtcgggtgtactgcattcctgagtccaggaag
aaactcaaggtgggagctgacacagaaaaacaacaaagcacttcagaggtgaagagggtg
ctggtgctggagcagaacccaaagtgggaggctctgacagaggtgctgcaggagatagag
aaggagaacaagagctctgaactcaaaccaggccacatcttgatctgtgccagtgatgac
agaacctgtgctcaacttcatgagtacatcagtcgtggctcagactccctactcaataga
ctctacgctcgcaccattggcaaaagagatgcccttttcgacccagacgcacacaaacaa
cagggccagagttgggccaggaaacaacagcctgagaaagagaccaaaggaaaaaaagcc
aaagggaaggcgggaaccaggacaaactcaaagagtaaaaagaggccgtctctgaccctg
actcaaatggttggaaacagagagggggatgagggagaagtgatgggcagcagtggggat
gagggaggcctgttggaaaaggaggaggaggagctaaagttagacttgtcgtctgacgcc
tactacggtgttctgaaagagccattgactgttatccaccctctgaggggctgcactgac
ccctacagtctgacgcgggtactgcacgaggtggagcccagttttgtggtgctttatgac
gctgagctcagctttgttcgtcagctggagatttacaaagcctccagaccggggaaacca
ctgagggtgtacttcctgatctatggtggctccactgaggagcagaggtacttgactggt
ctggctaaagagaaacaagcctttgaacacctcatcagagagaaggccactatggtagtt
cctgaggagagagagggaagagaagacaccaacctggatctgagcaggagtcaggagcct
gcttactctactaccaacacacgcaaagcggggggccaggagcagcccaaggagccgtcc
cgtgtgattgtggacatgcgtgagttccgcagtgagctcccttccctcctccaccgacgc
ggcctggacatcgagcctgtcaccctggaggtgggcgattacatcctcactgccgacacc
tgcgtggagcgcaagagcgtcagtgacctgattggctcgcttcagagcggacgcctctac
acccagtgcctgtccatgacacggtactaccggaagcccgtcctgctgatcgagttcgac
tcggccaagcccttttccctggtggcccgcaccgacttccgccaggagatctcagctaac
gacgtcacctccaagctgaccctcctcaccctgcacttcccccgcctcaggatcctttgg
tgcccctccccacacgccaccgcagaacttttccaggagctgaagaaaggtcgacccgag
ccggatgccgccgcggcccaggccatcactgccgagtcggacacggtggcagagtcagct
gacctcttcaaccctgggccatacgacttcctgcttcggatgccaggggttaatgcgaag
aactacagggctctggttaaacacgcagatagcctggcacacctagccaaactaagccag
gaaaggctagcacagattctggggcatgctggcaatgggaagtcgctctatgagttcctg
cataatactgtggacatccctgcccctgctcagaaaagtaaatag
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