KEGG   Oncorhynchus kisutch (coho salmon): 109870380
Entry
109870380         CDS       T09179                                 
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04510  Focal adhesion
oki04517  IgSF CAM signaling
oki04518  Integrin signaling
oki04519  Cadherin signaling
oki04520  Adherens junction
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
oki05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109870380
   04518 Integrin signaling
    109870380
   04519 Cadherin signaling
    109870380
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109870380
   04520 Adherens junction
    109870380
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109870380
   04810 Regulation of actin cytoskeleton
    109870380
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    109870380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109870380
   04147 Exosome [BR:oki04147]
    109870380
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     109870380
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109870380
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Mob_Pre VMAP-M0 Talin_R4
Other DBs
NCBI-GeneID: 109870380
NCBI-ProteinID: XP_031660553
Ensembl: ENSOKIG00005012154
LinkDB
Position
LG25:38015924..38073517
AA seq 1067 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDHIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVKSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIDSKMTQAKSWLRDPDAQPGDAGEQAI
RQILDEAGKVGELCAGKERRDILGTSKTLGQITDQVSEMRARGQGASPAAKQKAQQVSQG
LDVLAGKVENAGRKLEAMTNSKQVIAKRIDAAQNWLADPNGGPEGEENIRALLSEAKKIA
DMCEDPKERDDILRSIGEMAALTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTSK
AVANSRPAKAAVHLEGKIEQAQSWMENPTMDDGGVGQAAIRGLVAEGRRLANALPGPYRQ
ELVGKCEQVEQLMAQLADLAARGDGESPQARAVAQHLQESLKNLKGTMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPPNAPNRDQVFDERAANFENHANKLAATAEKAAAVGTANKSTVE
GIQAAVKSTRDITPQVVSAARIMLRNPGNQAALEHFETMNNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLEKCRAAMANHQPQMLVVGATSIARRANRILLVAKREVENSEDPRF
REIVKAASDELSRTISPMVMNAKAVAGNITDPSLQKGFLDSGHRILGAVAKVRDAFQPQE
PDFPPPPPDLDQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQEVGEMVSEPMM
MAARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGAGGNKRALIQCAKDIAKASD
EVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq 3204 nt   +upstreamnt  +downstreamnt
atgccggtttttcacacaaagacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaggtggacgggaaagctatcccggatctc
acggctcccgtggctgcggtgcaggcagctgtcagcaacctggttcgggtggggaaagac
actgtccagaccacagaagaccacataatgaagagagacatgcctccagctttcatcaag
gtggagaccgcgtgcaccaagctggtgcaggcggcgtccatgttgaaagcagacccttac
tccgtccctgctcgagattacctcatcgacggctcccgtggaatcctctctggcacctct
gacctgctgctcaccttcgacgaggctgaggttcgtaaaatcatccgtgtgtgtaaaggt
atcctggagtacctgaccgtggcagaggtggtggaatccatggaggatctgatcacgtac
accaagaacctgggacctgggatgacgaagatggccaagatgattgacgagagacagcag
gagctgacccatcaggaacaccgcgtgatgctagtcaagtctatgaacactgtcaaggag
ttgctgcctgtcctcatctcaggtatcaagatctttgtgacgaccaagacgtccggcagc
cagggagtagaggagtctctgaagaacaggaacttcaccttcgagaagatgagcgctgag
atcaacgagatcatcagggtgctgcagctcacttcctgggacgaagacgcctgggccaat
aagaaggatacagaggccatgaagagagctctggcgctcatcgactctaagatgacccag
gccaagagctggctgagggaccccgacgcccaaccaggggatgcaggggaacaggccatc
cgtcagatcctggatgaggctgggaaggtgggagagctgtgtgctgggaaggagcggagg
gatatcctgggaacatccaaaaccctggggcaaatcactgaccaggtgtctgagatgagg
gccaggggtcagggggcatctcctgcagccaagcagaaggcccaacaggtctcccagggc
ctggatgttctcgcggggaaagtggagaatgcaggccggaaactggaggccatgaccaac
tccaaacaagttatcgccaagaggattgacgctgctcagaactggctggcagaccctaac
ggtggtcctgagggagaggaaaacattagagctctcctgtctgaggccaagaagatcgct
gacatgtgtgaagaccccaaggagagagatgacatcctgaggtccatcggagagatggct
gctctcaccgccaagctctctgagctccggagacagggtaaaggtgatactccggaggcc
agggcattggcgaagcagatagccacagccctacagaacctgcagtctaagaccagcaag
gctgttgccaacagcaggcctgccaaggctgctgtccacctggaggggaagatagagcag
gcccagagctggatggagaaccctaccatggatgacgggggagtgggccaggcagctatc
cgggggctggtggcagagggccgtcgtctggctaacgctctgccaggtccctacagacag
gagctggtagggaagtgtgagcaggtggaacagctgatggcccagctagccgacctggcc
gccaggggtgatggggagtccccgcaggcgcgtgccgtggctcaacatctccaggagagc
ctgaaaaacctcaaaggaacgatgcaggaagcgatgacacaggaggtgtcagacatcttt
agcgacacgaccactcccatcaaactgctggctgtggccgccaccgccccacccaacgcc
cccaacagggaccaggtgtttgatgagagggcggccaactttgaaaaccacgccaacaag
ctggctgccacggcagaaaaggctgccgctgttggaaccgccaacaagagcactgtggag
gggatccaagctgccgtcaaatctacaagagatattacaccacaggtggtctctgctgcc
cgtatcatgctgagaaacccaggcaaccaggctgcgttggagcactttgagaccatgaat
aaccagtggattgacaacgtggagaaaatgacaggtttggtggacgaggctatagacacc
aagtctctgttggatgcctctgaggaggccattaagaaagacctggagaaatgtcgcgct
gccatggctaaccaccagccccagatgttagtggtaggggccaccagcatcgcccgtcgg
gccaaccggatcctcctggtagccaaacgggaggtggagaactctgaggatcctagattc
agggagatagtgaaggctgcgtctgatgagctgagccggaccatatctcccatggtgatg
aacgccaaggctgtggctgggaacatcaccgatccaagtctgcagaaaggcttcctggat
tcaggccataggatcctgggggccgttgccaaggtgagagatgcgttccagccacaggaa
ccagacttccccccaccaccacctgatctggaccagctgcacgtcagcgacgagcccgcc
ccaccaaaaccacctctccccgagggtgaggttcctccccccagaccccctcccccagag
gagaaggacgaggacttcccagagcaagaggtgggagagatggtgagcgagcccatgatg
atggccgccagacagctccacgaggaggcccgcaagtggtccagcaagggtaacgacatc
atcggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgcggt
gccggcgggaacaagcgtgccctcattcagtgtgccaaagacatcgcaaaagcctcagac
gaggtcacaaagttggctaaggaggttgccaagcagtgcacagacaaacgcatccggacc
aacctgctccaggtgtgtgagcgcatccctaccatcagcacacagctgaagatcctctcc
acagtcaaggccaccatgttgggtcgtaccaacatcagcgaggaggagtccgagcaggcc
acagagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggttaga
gaggccgaggctgcctccatcaagatccggacggatgccggtttcaccctgcactggatc
cgaaagaccccctggtaccagtaa

DBGET integrated database retrieval system