Oncorhynchus kisutch (coho salmon): 109870418
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Entry
109870418 CDS
T09179
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109870418 (vps35l)
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Retriever complex
109870418 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109870418
NCBI-ProteinID:
XP_020316512
Ensembl:
ENSOKIG00005021269
LinkDB
All DBs
Position
LG25:12227771..12241953
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AA seq
977 aa
AA seq
DB search
MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPPTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPVIIYSDPSPDSFTADEVNDTAKETCLNWFFKIAS
IRELIPRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEV
APHLKDSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRA
PEALLTEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPQHLLFG
SLGRSLACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVL
SDIIKHMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVC
LSIMDVFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSF
GRDFEQQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAA
YSFITIPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLR
SSEGFLLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALP
LLAAMSQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESIHR
QGSLAFSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPD
MVHLSDVLHRLTLQSRT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggttgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcctcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacagaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccctccaactctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagttattatttattcagatccttctccagactcctttacagct
gatgaagtgaatgacacggccaaggagacctgcctcaactggttcttcaaaattgcctcc
atcagagagctcatcccacgactatatgtcgaggtagcgctcctgaagtgtaaccgtttc
ttgaccaagtgtgggatccaggagacggtgcctcgcctcacagctatgatccgggggata
ggggaccccctggtggccgtgtatgcccgggcctacctctgtcggattgggatggaggtg
gctcctcacctgaaggacagcctgaacaagaacttctttgacctgctggggacgttccgt
cagatccacggcgacagtgtccagaaccagctggtcctgcagagggtggagatccccgtc
tacctgaccctctactcccccgccatccactggatcctgcagtgtgtctcctacagagca
ccagaggccctgctaacagagatgatggagagatgcaaaaaacttgggaataatgccctg
ctgctgaactcggtgatgtgggcgttcagggcggagtttatcgcgacgagagccaccgac
ttcatcggcatgatcaaggactgtgatgaggcaggattccctcagcacctgttgtttggc
tctctgggccgcagcctggcctgtgctgaccctcctgaggcggaaaggctgcccatcctc
aatgaggcctggaaggtcatcaccaaagtgcgaagtccacaggattacatcaactgtgct
gagatctgggtggagttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctc
tctgacatcatcaagcacatgaccccagaccgggcctttgaggatgcctatcctcagctt
cagtctgtgatacggaagatcctcacctactttcatgacttctctgtcctcttctccatg
gagcgtttccttcccttcatggacatgttccagaaggacagcgtcagggtgggggtgtgt
ctctccatcatggacgtcttcatcaaacaccagcaggagcccactagagatcctgtcatc
ctcaacgctctactccacgtctgcaagaccatgcacgactctgtcaatgctctgacgctg
gaggacgagaagagatctctggccttgttgatcaatggcttcatacgcatggtgtcattt
ggccgtgactttgagcagcagctgagtttctgtgtggaggcccgggccaccttctgtaac
ctggagccagtgttggtgcagctcatccacactgtgaaccagctggccatggagacgagg
cgtgtgatgagggggagccactcccgcaagactgctgcttttgtcagggcatgtgctgca
tacagcttcatcaccattccctccctcaccagcatcttcagccgcctcaacctctacctg
ctgtctgggcaggtggccctggccaaccagtgtctttcccaggcggatgcattcctgaag
gcagcggtcagtgtgttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgc
tcttctgagggcttcctgcttgacttcatcaacaacttcctgtcagcactactagttgtg
ccggaccacccagaggcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcag
gattacacctgggaggacaacagtgacgccaaggtccatgtctacatcagcgccctgcca
ctactggctgccatgagtcaggagagctacctctactctatccccaaagtggactcgaat
gaaacactttatggaggagatcccaagtttttggcagagatcaacaagttatgtgaaact
ctgattggacaagtgctggaccacctcaagaccttgggtagagatgagagcatccataga
cagggtagtctggccttctctctgtttggctgcctcctagctcacggggacctgcgcaac
aacaaactcaaccagctggctgtcaacctgtggaatctgagccacaagcagggttactgc
aacacacgcacctccgtgcggacattagagtttattaagcaccaggcccagcagccagac
atggttcacctttcagacgtgctccaccgcctcaccttgcagtccaggacctga
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