KEGG   Oncorhynchus kisutch (coho salmon): 109870423
Entry
109870423         CDS       T09179                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109870423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109870423
   03021 Transcription machinery [BR:oki03021]
    109870423
Transcription factors [BR:oki03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109870423
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109870423
  RNA polymerase III system
    TFIIIB
     109870423
  RNA polymerase I system
    SL1/TIF-1B
     109870423
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 109870423
NCBI-ProteinID: XP_020316518
Ensembl: ENSOKIG00005009143
LinkDB
Position
LG25:25769044..25773185
AA seq 298 aa
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQQRQQQQ
QASSQQAGVPGGLGQTPQLYHSQTVTTTTLPGNTPLYTATPLTPMTPITPATPASESSGI
VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC
TGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFS
SYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq 897 nt   +upstreamnt  +downstreamnt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
actcctggtatgcccattttcagccccatgatgccctatggcagtggtctgacgccccaa
cctgtcacaaacacaaacagcctgtctctcctggaagagcagcagcggcaacaacagcag
caggcttcgtcccagcaggctggggtgccagggggtttgggccagacaccacagctttat
cactcccaaacggtcaccaccaccacactgccaggaaacactcccctctacaccgctaca
ccgctaacccccatgacacccatcacacctgccactcctgcctctgagagttctgggatt
gtccctcagttacagaacatcgtatccactgtgaacttgggctgcaaacttgacttgaaa
acaatagcactgcgagctagaaatgctgagtacaaccccaagcgatttgctgctgtaatc
atgagaatacgagagccaagaacaactgcacttatcttcagttctggaaaaatggtttgc
acgggagccaaaagtgaagagcagtcccgcctggcggccaggaaatacgccagagttgtg
cagaagttgggcttcccagccaaatttcttgatttcaagattcagaacatggtgggcagc
tgtgatgtcaaattccccattcggttagagggacttgtactaactcaccaacagttcagc
agttatgaacctgagttgttccctgggctaatctacagaatgatcaaacccagaattgtc
ctgctgatattcgtttcaggcaaagttgtattaacaggtgcaaaggtcagaggagaaatt
tatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacgacgtaa

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