Oncorhynchus kisutch (coho salmon): 109870423
Help
Entry
109870423 CDS
T09179
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109870423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109870423
03021 Transcription machinery [BR:
oki03021
]
109870423
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
109870423
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109870423
RNA polymerase III system
TFIIIB
109870423
RNA polymerase I system
SL1/TIF-1B
109870423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
109870423
NCBI-ProteinID:
XP_020316518
Ensembl:
ENSOKIG00005009143
LinkDB
All DBs
Position
LG25:25769044..25773185
Genome browser
AA seq
298 aa
AA seq
DB search
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQQRQQQQ
QASSQQAGVPGGLGQTPQLYHSQTVTTTTLPGNTPLYTATPLTPMTPITPATPASESSGI
VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC
TGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFS
SYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
actcctggtatgcccattttcagccccatgatgccctatggcagtggtctgacgccccaa
cctgtcacaaacacaaacagcctgtctctcctggaagagcagcagcggcaacaacagcag
caggcttcgtcccagcaggctggggtgccagggggtttgggccagacaccacagctttat
cactcccaaacggtcaccaccaccacactgccaggaaacactcccctctacaccgctaca
ccgctaacccccatgacacccatcacacctgccactcctgcctctgagagttctgggatt
gtccctcagttacagaacatcgtatccactgtgaacttgggctgcaaacttgacttgaaa
acaatagcactgcgagctagaaatgctgagtacaaccccaagcgatttgctgctgtaatc
atgagaatacgagagccaagaacaactgcacttatcttcagttctggaaaaatggtttgc
acgggagccaaaagtgaagagcagtcccgcctggcggccaggaaatacgccagagttgtg
cagaagttgggcttcccagccaaatttcttgatttcaagattcagaacatggtgggcagc
tgtgatgtcaaattccccattcggttagagggacttgtactaactcaccaacagttcagc
agttatgaacctgagttgttccctgggctaatctacagaatgatcaaacccagaattgtc
ctgctgatattcgtttcaggcaaagttgtattaacaggtgcaaaggtcagaggagaaatt
tatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacgacgtaa
DBGET
integrated database retrieval system