Oncorhynchus kisutch (coho salmon): 109870487
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Entry
109870487 CDS
T09179
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109870487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109870487
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109870487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
109870487
NCBI-ProteinID:
XP_031660634
Ensembl:
ENSOKIG00005032224
UniProt:
A0A8C7IW72
LinkDB
All DBs
Position
LG25:complement(15251286..15279525)
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AA seq
1222 aa
AA seq
DB search
MNVNQQTPMASPYGPPQPGYGQPSYAPLGGGYPGPYGPYNGPAAAYQPGAPPQGYSPYAS
FPSKAVAANPVSDLSSPLDLGPARGPLTSAPRPVSTPQAYSQYPQGDSQNGPPPMDHSMA
QPAHRSPVSQPYSHGAMNLSGPHPSYSQQYGAPPPMQQVTNQMSGMQIGSGPPTSVGPGY
AHHPSSQPPISAAYSSAAPPSYTQAPPPLSAAPSQPPPPSEPAASQPYYGGPPPPQQQPF
PSAHHPSQPFVSSSPYLGPPSQPQAPPVSQQQSFPPGPPAQQPFPNSAPPPVSQASYSGP
PPLTQHSFPPSSQSGPFPPISISPSQYPGPQPQSQPGPPPFHSGPSPRGPIPPPSMSQQQ
ANHLPPGPMQQQQPPQPGMQGGYPTQQNGAFGQPRGPQPGYAGPHYPGQQNYGAGPAPAP
APPAQKRLDPDSIPSPQASELPAVQKSRHRIDPDAIPSPIQVIEDDRVNKSSEPFTTGVK
GQAPPLVTTNFQVKDQGNASPRFIRCTAYNMPCTADMAKQSQVPLAAVIKPLAMLPPDET
PPYIVDHGDGGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKR
VDCYDRPELSQGSYEFVATVDYCKNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQELKTL
LDYLPRENPEADSVVRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLDGFLVG
VNDSRMVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFVFHSTLPIAE
APGKLKNREDKKLVGTDKEKSLFQPQSGFYSNLSKECVAQGCCVDLFLFPNQYVDVATLG
VVPVSTGGSVYKYTYFQAETDRERFLNDLRRDVQKPMGFDAVMRVRTSTGIRATDFFGSF
FMSNTTDVELAGLDCDKTVTVEFRHDDKLSEDTGALMQCAVLYTSCSGQRRLRVHNMAVN
CCSQLADLYRNCETDTIINFFSKYAYRSILNTPTKTVRDTMVNQCAQILACYRKNCASPS
SAGQLILPECMKLLPVYLNCVLKSDVLQPGADISLDDRAYLRQLLSCMDVSESHIFFYPR
LLPLVKLDGGSLPMAVRNSEERLSKGGVYLLETGLHLFLWVGANAQQELLSNIFGTPTFS
QIDPNMTSLPELDNPFSQRLREIIDSFRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKST
SGGASYVDFLCHMHKEIRQLLS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagcagactcccatggcttctccgtacggcccaccccagcctggctat
ggccagcccagctacgctcccctgggaggaggctaccctggcccctacggaccctacaac
gggcccgctgcagcctaccagcctggggctccaccacaaggttactctccctatgccagt
tttccctctaaggctgtggcagctaaccctgtctctgacctgtcctctcctcttgactta
ggacctgccagaggcccccttacctctgccccccgtccagtctccaccccccaggcgtac
tcccagtatccccagggagactctcagaacggacccccacctatggatcactctatggcc
cagccagctcacaggtcgccagtgtctcagccgtatagccacggtgctatgaacttgtcc
gggccacacccctcctactcccagcagtacggtgctccgccccccatgcaacaggttacc
aatcagatgtcagggatgcagatcgggtccggtccccccacctctgttgggccgggatat
gctcaccatcccagctcccagcctccaatcagtgctgcatactcctctgcagccccacct
tcctatacgcaagctcctcccccattgtctgctgccccctcccagcctccccctcccagt
gaacctgcagcctcccagccttactatggtggcccccctcccccccaacaacaacccttc
ccctctgcccaccatccctcccaacccttcgtctcctcctctccatacttgggccctccc
agccaacctcaggcccctccagtctcccaacagcagtccttcccacctggcccccctgct
cagcaacccttccccaactccgcccctcctccagtctcccaggcctcctactctggtccc
cctcctctcacccagcactctttccctccctcctcccaatctggccccttcccacctatc
tctatatccccttcccagtacccaggtccacagccccagtcccaacccggaccccctccc
ttccactctgggccctctcctcgaggccccatcccacccccctccatgtcccagcagcag
gccaatcaccttccccccggccccatgcagcaacagcagcctcctcagcctggcatgcag
ggaggatacccaacccagcagaatggtgcgtttgggcagcctagagggccccagcccggc
tatgcaggcccgcactatcccgggcagcagaactacggagcaggccctgcccctgcaccc
gctccccctgcacagaagagactggaccctgattccatccccagcccgcaagcgtctgag
ctgccggctgtgcagaaatcgagacatagaatagacccagacgctatccccagcccaatt
caggtgattgaggatgaccgggtcaacaagagcagtgagccgttcaccactggggtcaaa
ggtcaggctccacccctggtcaccaccaacttccaggtgaaagaccagggcaatgccagc
ccgcggttcatccgctgtacagcctacaacatgccctgcaccgccgacatggccaaacag
tcccaggtccccttggccgctgtaatcaaacccctggctatgctgccccccgacgagacc
cctccgtacatcgtggaccatggggacggcggtcctatccgctgtaaccgctgtaaggcc
tacatgtgtccctacatgcagttcatcgagggcggacgccgcttccagtgtggcttctgc
agctgcgtcacagaggttcctccccactacttccagcatctggaccacacagggaagagg
gtggactgctacgatcggccagagctctctcagggcagctacgagtttgtggccaccgtc
gactactgtaagaacaataagctcccccagcccccgtcgttcatcttcttcatcgatgtg
tcttacaacgccgtgaagagcggcatggttaacatcgtctgtcaggagctcaagactcta
ctggactacctgcccagggagaatccagaggcagactcggtggtgcgtgtgggttttgtg
acctacaacaaggtgttgcacttctacaacgtcaagtccagcctggcccagccccagatg
atggtggtcagtgacgtcagtgacatgttcctccctctgctcgacggcttcctggtcggc
gtcaacgacagccggatggtcatcgagagtttgctagaccagattccggagatgtttgca
gacaccagggagactgagactgtgtttggaccagtcattcaggcaggactggaggcactg
aaggctgcagactgtgccgggaagctgtttgtgttccactccactctgcccatcgctgag
gctcctgggaaactgaagaatagagaggacaagaaactagtgggaacagacaaggagaag
tctctgttccagccccagtctggtttctatagtaacctctctaaggagtgtgtagcacag
ggctgctgtgtagacctcttcctgtttcccaaccagtacgtcgacgtggcaacgcttggc
gtggtgcccgtctccaccgggggttccgtctacaaatacacctacttccaggccgagacg
gaccgtgagcggttcctgaatgatctgcggcgagacgttcagaagccgatgggcttcgat
gctgtcatgagggtccgaaccagcacaggtatcagagcgacagatttcttcggctcgttc
ttcatgagcaacacgacagacgtggagctggcaggcctggactgtgacaagactgtcacc
gtggaattccgccacgacgacaagctcagcgaggacaccggcgcgctcatgcagtgtgcg
gtgttgtacaccagctgtagtggtcagcggcgtctgcgggtccacaacatggcggtcaac
tgctgctcccagctcgccgacctctaccggaactgcgagacggacacaatcatcaacttc
ttctccaagtacgcgtaccgtagcatattgaacacccccaccaagacagtgagagacacc
atggtgaaccagtgtgcccagattctggcctgctaccgcaagaactgtgccagcccctcg
tctgccggacagctgatcctaccagagtgtatgaagctgctgccggtctatctgaactgt
gtgttgaagagtgacgtgctgcagccgggagctgacatctcattggacgacagagcctac
ctgagacagctgctcagctgtatggacgtatccgagagccacatcttcttctatccccgc
ctactgcccctggtgaagttggatggagggtcgttgccaatggcagtgcgtaactcagag
gagcgcctgtcgaagggcggagtctacctcctggagacagggctccacctcttcctgtgg
gtgggagccaatgctcagcaggagctgcttagcaacatctttggaacgcccaccttcagc
cagatagaccccaacatgacgagtctgccggagctggacaacccgttctcccagagactc
cgagagatcattgactccttcaggtcacaacggtcacgatacatgaagttgatggtggtg
aagcaggaggacaaggcggagctaatctttaagcacttcctgtgtgaggacaagagcacc
agcggaggagcttcctatgtcgacttcctgtgtcacatgcacaaggagatccgccagcta
ctcagctag
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