Oncorhynchus kisutch (coho salmon): 109870494
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Entry
109870494 CDS
T09179
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109870494
04020 Calcium signaling pathway
109870494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109870494
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109870494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109870494
NCBI-ProteinID:
XP_031660682
Ensembl:
ENSOKIG00005043760
LinkDB
All DBs
Position
LG25:17464572..17662600
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AA seq
2457 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDHDCESERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVELGNYYHTENDDEN
PFICSMPRENGMRLCSSVPTLYEEGGLQCQMDMKSYNSTDNTTCINWNQYYSNCSAGHVN
PFKGAINFDNICYAWIAIFQVITLEGWVDIMYFVMDSHSFYNFIYFILLIIIGSFFMINL
CLVVIATQFSETKQRESQLMKEQRIRFLSNASTLASFSEPGSCYDELLKLLVHVLRKGCR
QVAHVCRALMRRAGMNIAASPPALERERGSQRRRRKASRQGSVVSRKGSMSVHHLAHQHH
HHHHHYHLVNGSVRGGLGGRGVECVGGGGADVETGSHSNNGGAGRLMLGPPPSTSDLNLA
TPASPANPALGIMCHTDCHLEPTTPTTLTPSPFSLAPIPMSRAMKRNSVPFAAPGPKNYP
TLQPRALMESRSVSVTASTISNINLNLNIPPLTLERGPQSLVDTHTPTPAQLSNRDLSVI
GTLDPSFPFDPESCPYCAKALAGESEGTDVNENPGDSDSEGIYEFTQDLHHRDRRDRRDS
RQPRKGQRKLGTTAGRVVRAWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHEQP
DELTNALEISNIVFTSLFALEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQGG
GLSVLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFG
CKFGSERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTTPVAALYFIALM
TFGNYVLFNLLVAILVEGFQTEAPPVSLPSTTPLHDATAVETNQGEESKSVSEADLSSRS
MEDVNGSRKDVSGSPVVPINGHVDLKTSLTPPLITHTAATPMPVPKLPAVGDPALGYESR
RGSNVSMDLTSYDKSPTSARSTSPYAPWCSASGWTSRRSSWNSLGRAPSLKRTKLQSGER
RSLLSGEGGSSSEDEEGGGGGTSEGDDASLCRINSMSQPRHRRMESVETRGSIDLAPDTL
LQVPYLYRSASMHSSRPPSLGGLRAPEHSDCNGKGTSAPGGALAPTQLSLEDNTEDDAAE
EEVVVGHFARLSGWLDRKQPEWCRQRDTWSLYILPPDSRFRMACNKIITHKMFDHIVLVI
IFLNCITIAMERPRIDPYSVERIFLTLSNYIFTAIFVAEMTVKVAALGWLFGDKAYLRSS
WNILDGILVMISAIDILVSLVSNSSPKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETL
MSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFACQGDDVRNITNKSDCIMANYKWVRQ
QYNFDNLAQALMSLFVLASKDGWVDIMYDGLDAVGVNQQPQLNYNPWMLLYFISFLLIVS
FFVLNMFVGVVVENFHKCRRSQEAEEAKRREEKRLKRMEKKRRKAQSKPYYSDYSPTRLL
IHKMCTSQYLDLFITIVIALNVITMAMEHYQQPKELDEALKICNYIFTIVFVLESVFKLV
AFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLL
KMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLICDELHPCEGLGRYA
TFKNFGMAFLLLFRVSTGDNWNGIMKDTLRDCQQENAGTCYNTVVSPIYFVSFVLTAQFV
LVNVVIAVLMKHLEESNKEAKEEAELEAELELELQHGGRGGCGSGRSPQLSPLALGMEEG
SGSSPWRSPEREIQRGNAMDSPPADITRRDSIHISTDASLGLEPPLERRAMFDSVSSVIQ
GSMEGELSLMDNLSGSICHYYALPPLPSKHRSDKKIPLAEMEALSLTSDKSWSLALTDDS
TPDDINPLLLTSLESNVELLDPGEPLEDNLLSVRKSAVSRTHSLPNDSYMFLPLEPFGPP
GAGLAPGLSPVLTQATGPQHIEALSSALSGSSTSVRSQPEESSQQSAVPTDFFRPISPHS
LSDSENIPRLPPPQHTHTLSRTLRRQVAVSNDSQEALWSDGGECEEGVLNVASLALPLSS
SSSSSSHLHQQPSLWLVPATPGVSPQLSRPSSVHTQHPFSNHDQHHLSSSPNSPSSLSSP
PPPLPSARPWRQEEASADHEVSLINRAGLAGSEDVTGVGLGSEVGGLNDSYQGHEVGRGE
GSRPCLRQLKRFHSADAQGRSILASRPRPLSWLDDPRRHSVEVCSSVESSPQRSTTSSGF
VSRADSLQIHSQTTTKTLPSPRRKKKMSPPCISVDPPDGLESQPGLHPTLGGLGGLGMPP
PLPSRDTSCLRRRAPSSDSKDSFDLGAGEGLGQEGGGPNPKLLTLPSFSFEKTSSEH
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcttgttgaactgcgtcaccctggggatgttccaaccctgtgaggaccac
gactgtgagtcggaacgatgcaagatcctggaggactttgatgactttatctttgcgttc
tttgcggtggagatggtcatcaagatggtggcgctgggcatctttgggaagaagtgttat
ctaggagacacctggaacaggctcgacttctttatcgtactggccggaatgctagagtac
tctctgaacctgcagaacgtgagtttctcagcagtgagaacggttcgagttctgagaccc
ctccgagccatcaacagagtacctagtatgcgtatcctggtgaccctgctactggacacc
ctgcccatgctggggaatgtcctgctgctctgtttctttgtcttcttcatcttcggcatt
gtgggcgtgcagctgtgggcggggctactgaggaaccgctgcttcctgcctgagaacttc
tcacttcctctgtccgtcgagctcggcaactattaccacacggagaatgatgacgagaac
cccttcatctgctccatgcccagggagaacggcatgcgcctgtgttcctctgtgcctacc
ctgtatgaggagggaggtctccagtgtcagatggacatgaagtcctacaacagcacagac
aacaccacctgtatcaactggaaccagtactacagtaactgctcggcgggacacgtcaac
cccttcaaaggggccatcaactttgataacatctgctacgcctggatcgccatctttcag
gtgatcacgctggagggctgggtggacatcatgtactttgtgatggattctcactccttc
tacaacttcatctactttatcctcctcatcatcattggctctttcttcatgatcaacctg
tgtctggtcgtcatcgccacccagttcagtgagaccaagcagagggagagccagctgatg
aaggaacagcgcatccgtttcctgtccaacgctagtaccctggcctccttctccgagccg
ggctcctgctacgacgagctgctcaaactcctggtccatgtcctccgcaaggggtgcagg
caggtggcccatgtctgtcgggccttgatgcgccgtgctgggatgaacatcgcagcctct
ccccctgccctggagcgagagagggggagccagagaaggaggaggaaggcttccagacag
ggttctgtggtctccagaaaagggtcgatgtccgttcatcacttggctcaccaacatcat
catcatcatcatcactatcacctagtgaatgggagtgtgagggggggactagggggtagg
ggggtagagtgtgtcgggggaggaggggcggacgtggagacgggttcacatagcaacaac
ggtggcgctggacggctcatgttgggtccacctccatcgacctctgacctgaacttggcg
accccggcgtcaccagccaatcccgcgctgggcatcatgtgccacacagactgccacctg
gagcccaccacccccactaccctcacccctagccccttctccctggcacccatccccatg
tccagggctatgaagaggaactcagtgccctttgctgcccccggacctaagaactacccc
accctacagcccagggcactaatggagtctagaagtgtcagtgttacagctagtaccatc
agtaatataaacctcaacctcaatataccaccactaaccttggagaggggaccacagagt
ctggtggacacacacacacctacgccagcccagctatccaaccgtgacctgagtgtcatc
ggaaccctggacccctcgttcccctttgaccctgaatcatgcccatactgtgccaaggcc
ctagcaggggagtcagagggcacggatgtaaacgagaaccccggggactcagacagcgag
ggcatctacgagttcacccaggacctccaccacagagaccgcagggaccgtcgggacagc
cgtcagcccaggaaggggcagcgaaagctgggtaccacggcagggcgagtggtccgggcc
tggaggctggtgtgtgacacctttaggaagatagtcgacagcaagtactttggaagaggg
atcatgatcgccattctgattaatacactgagtatggggattgaataccacgaacagcct
gatgagctgaccaatgcgttggagatcagtaacatagtgttcaccagtctgtttgccttg
gagatgttactcaaggtgttggtctatgggccattcggatacatcaaaaacccctacaac
atttttgacggaatcatagtggtcatcagtgtatgggagatcgtgggccagcagggcggt
ggtctgtctgtgctgcgtaccttcagactgatgcgcgtgttgaagctggtgcgcttcatg
cccgctctgcagaggcagctggtggtgctgatgaagacgatggacaacgtggccaccttc
tgtatgctactgatgctcttcattttcatcttcagtatcctgggaatgcatctgtttggc
tgtaagtttggatcagagagagatggagacactctaccagacaggaagaactttgactct
ctgctctgggccatcgtcactgtgtttcagatcctaactcaagaggactggaacaaggtg
ctgtataatggtatggcttccaccactcctgtggctgctctctacttcattgccctcatg
acctttgggaactacgtactcttcaacctgctggtggccatcttggtcgaaggcttccag
actgaggctccccctgtctctctaccctccaccacccctctgcacgatgccacggctgtt
gagactaaccagggagaagaatccaagtcagtgtcggaggcagatttatcctcgaggagt
atggaggacgtgaacggcagtagaaaggatgtgtctggctccccggtagtcccaataaac
ggtcatgttgacctgaagaccagtctgacccctcctctgattacccatactgctgccacc
cccatgcccgttcccaagctgcctgccgtgggtgaccctgccctgggctacgaatcccga
cgaggcagcaatgtctccatggacctaacctcttacgacaagtctccgaccagtgcccgt
agcacctccccttacgccccgtggtgctctgccagtggttggaccagccgtcgatcgagc
tggaacagcttaggccgtgccccctcgctcaaacgaacaaagcttcagtctggcgaacgg
cggtcgctcctctccggcgagggagggtccagttcggaggatgaggaggggggtggaggg
gggacatcggagggggacgatgcatccctgtgtcgtattaactccatgtcccagcccaga
cacaggaggatggagtcggtggagaccagggggtccatagacctggcccccgacacactg
cttcaggtgccctacctgtatcgctcagccagtatgcacagctccagacccccctcgcta
ggaggcctgagagccccagaacacagtgactgtaatgggaagggtacttcggcccctggc
ggggccctggcccctacacagctctccctggaggacaacacagaggacgacgcagcagag
gaggaggtggtcgtgggtcattttgccaggctgtcaggctggctggacaggaaacagcca
gagtggtgtcgacagagagatacctggtccctgtacatattacccccagactccaggttt
cggatggcgtgcaataagatcataacccacaagatgtttgaccacattgttctggtcatc
atcttcctcaactgcatcaccatcgccatggagaggccgaggatagacccatacagcgtg
gagcgtatcttcctcacgttatccaactacatcttcacagcgatcttcgtggctgagatg
acagtcaaggtggctgcactgggctggttatttggtgataaggcctacctgaggagcagc
tggaacattctagatgggattttagtgatgatttcagccatagatatcctggtctcattg
gtatcgaacagcagccccaagatactgggcatgctcagagtgctgcgcttactacggacg
ctcaggccactacgtgttatcagcagggcgccaggtctgaagctggtagtggagactctg
atgtcatctctgaagcctatagggaacatcgtggtcatctgctgcgctttcttcataatc
tttggtatcctgggagtacagctcttcaaggggaagttctttgcatgtcagggagatgac
gtgagaaacatcaccaacaagtcagactgtataatggccaactacaaatgggttagacag
cagtacaactttgataacctggcacaggctctgatgtctctgttcgtgctggcttctaag
gatggttgggtggatatcatgtatgatggattagatgcagtaggagtcaaccaacagcca
cagctgaactacaacccctggatgctcctctacttcatctccttcctgctcatcgtcagc
ttcttcgtgctcaacatgttcgtgggtgtggtggtggagaacttccacaagtgtcgtcgc
agccaggaggccgaggaggccaagcgcagggaggagaagagactgaaacggatggagaaa
aagagacggaaagctcagagtaagccttactactcggattactcccccactcgtctcctc
atccacaagatgtgcacctcccagtatctggacctcttcattaccattgtcatcgcactc
aatgtcatcaccatggcgatggaacactaccagcagccaaaggagttggacgaggcgctg
aagatctgtaactacatcttcaccatcgtcttcgtcctggagtctgtcttcaagctggtg
gcctttggcttccgacgtttcttcaaggacaggtggaaccagctggacctggccatagtg
ttgttgtccatcatgggcatcactctggaggagattgaggtcaatgcatccctgcccatc
aaccctactatcatcagaatcatgagagtgctaaggatagcacgagtgctgaagctactg
aagatggcagtggggatgagagcgttgctggacactgtcatgcaggctctgcctcaggtg
gggaatctgggtcttctcttcatgctgctcttctttatcttcgcagcactgggagtggaa
ctgtttggtgatctcatttgtgatgagctgcacccgtgtgagggcttgggacgctacgct
acgtttaagaactttggcatggccttcctgttgctgttcagagtatccaccggagacaac
tggaacggcattatgaaggacaccctgcgagactgtcaacaggagaatgcaggcacctgt
tacaacacggtggtctctcctatctactttgtctcctttgtgctgactgcccagtttgtc
ttggtcaacgtggtcatagccgtcctcatgaagcacctggaggagagcaacaaagaggcc
aaggaggaggcagagctggaggctgaactagagctggagctccagcatggaggaagggga
gggtgtggcagtgggagatcaccccagctaagccctctggccctgggcatggaggaggga
tctggcagctccccctggaggtctccagagagggagatccagaggggcaatgcgatggat
tctcccccagcagatatcactagaagagactccatacacatcagcactgatgcttcgcta
ggcctggagccaccactagagcgaagagcgatgtttgactcggtctcctcggtgatccag
ggttcgatggagggagagttgagtctgatggacaacctgtcagggtcaatatgtcactac
tacgccctacccccactacccagcaagcaccgcagtgacaagaagatccctctagcggag
atggaagctctctctctgacctccgacaaatcctggtccctagctctcaccgacgactcc
acccctgatgatattaaccctctcttactaaccagtctggagtccaacgtggagttactt
gatcctggggagccgctggaggacaacctgttgagtgtacggaagtcagcggtgagccgc
acccactctctacccaatgacagctacatgttcctgcctctggagcccttcggaccccca
ggagccggcctggctcctggcttatctccagtactgacacaggctacagggccgcagcac
atagaggcacttagcagcgccctgtcaggctccagtacctcggtgcggtcccaaccagag
gagagctcccagcagtcggctgtgcctacagacttcttcagacccatcagtcctcacagc
ctctcagactcagagaatataccccgactacccccgccacagcacacacacacacttagc
cgcacactccgcagacaggtggcagtatctaatgattcccaggaggctctgtggtctgac
ggaggggagtgtgaggagggggtcctaaatgtagcttccctagccctccccctttcctcc
tcctcttcctcatcctcccatcttcaccagcagccttctctctggctggtccctgccacc
ccaggggtgtcccctcaactgtcgcgccccagtagtgttcacacccaacaccccttctca
aaccacgaccagcaccacctctcctcctcacccaactccccctcctccctctcctcaccc
cctcctcccctcccctccgctcgcccctggagacaggaagaggcctcggcagatcacgag
gtgtcgctcatcaaccgggcggggctggcggggagtgaggatgtcaccggtgtcggactg
gggtcagaggtcggaggtctcaatgacagttaccaaggtcatgaggttggccgtggtgag
gggagccggccgtgcctgagacagctgaagaggttccacagcgctgacgcccagggtcgg
agcattctagcgtcccggccacgccccctgtcctggttggacgatcctcggcgccactca
gtggaggtgtgttcgtctgtagagtccagtccccagcgcagcaccacgtcctcggggttc
gtctccagagcagacagcctccagatccattcccagaccacaacaaagaccctgccctct
ccccgacgcaagaagaaaatgagccccccgtgtatctccgtagacccccctgatggactg
gagtcccagcccggcctccaccctaccctgggaggtttggggggcctagggatgccccct
cccttacccagccgggatacctcctgtctgaggagacgggctccctccagtgactccaag
gactcctttgacctcggggcaggggaggggctgggccaggagggaggggggcccaacccc
aagctgttgactctgcccagcttctccttcgagaagacaagctctgagcactga
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integrated database retrieval system
