Oncorhynchus kisutch (coho salmon): 109870506
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Entry
109870506 CDS
T09179
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109870506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109870506
03021 Transcription machinery [BR:
oki03021
]
109870506
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109870506
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109870506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
109870506
NCBI-ProteinID:
XP_031656276
Ensembl:
ENSOKIG00005000790
LinkDB
All DBs
Position
LG2:complement(67829743..67861488)
Genome browser
AA seq
757 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNASETSKCGMESQSGDGNTEIQTNGLDFQRQTLQTTSAIT
NAHTQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQLLLQQAQAQ
LLAAAMQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGYP
YEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQGQ
SLLTQLPQSQANLLQTHPSITLSTQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEEP
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKL
KPLLEKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEKR
FLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINTPSGGYSNTGTGSSPIKT
IFTPTTPLVASTASLVTSNTPTTLTVNPVMPLNSTSVSGLTFTGTTIGATTNTASVISTA
PMVTAVTSSPSLSPSPTTLQATAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLSA
ALQGAAQLPTSASFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNPAMLSNSTLAT
IQGLWSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNLV
SAGAAGGGALQVSADHQVTTATVPVPASTITTASRAQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgcgtcagaaacgagtaaatgtggaatggagagtcagagtggggacggcaacacagaa
atccaaacgaatggactggactttcagaggcagacgcttcagaccacaagcgcaatcacc
aacgctcacacacaggctctcctccaacagtccaagtcagaagactcgggtgcaattccg
acctccgtccagcagggggtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagttgttgttgcaacaggcccaggcccag
ctcctagcagcagccatgcagcagtcagccagccagcagagcagcactacgggggccagc
atctctgcctctgcagccacccctatcacacaactgcccctgtcccagcccatccagatc
acctctattccctctggttctacccatcttccaggccagctaagccagctgggatacccc
tatgagatggcgaccttcagcagttacctacctcagttacaacagctgcagcagcagaac
ctgaccatgccccagtttgtcctggttcagcctggccaccacatcgctacccagctgcag
cctggccagttcatcatctcacagtcaccacagggccagcagagtctcctgcaaggccag
agtcttctaactcaactacctcaaagccaagccaacctcctgcagactcatcccagcatc
acgctctccacacagccagcgactccaacccgcacgatagcagccactcccatccagcct
ctgtcccacagccagacctcaccccctaaacgcctggccacgcccagtctggaggagccc
agtgacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaactg
ggcttcacacagggagatgttggcctggctatgggcaagctgtacggtaacgacttcagc
cagaccaccatctcccgcttcgaggccttgaacctgagctttaagaacatgtgcaagctg
aagccactgctggagaagtggctcaacgatgcagtttatgcagacaatctgtcgtctgac
caggccctgtccagccccagcgccctgggctcccctggcctgggtatggaggggctgaac
cgcagacgcaagaagaggaccagcatcgagaccaacattcgtttggccttagaaaagaga
tttctggaacagaaccaaaaacctacctctgaggagatcaccatgatcgccgaccagctc
aacatggagaaggaggtgatccgggtgtggttctgtaaccgccggcagaaagagaagagg
atcaacacccctagtggtggatatagcaacaccgggacaggcagcagccccatcaaaacc
atcttcacccctacgacccccctggtggccagtacggccagccttgtgaccagtaacaca
ccgaccacactgactgtaaacccagtgatgcctctcaacagcaccagcgtgtctggcctg
accttcacaggcacgaccatcggagcgaccacaaacacggcgtctgtcatctccacggca
cccatggttactgcggtgaccagctccccatcgctaagcccctcccccacgaccctccag
gccacggcggcggagaccggcggaacccaggagcacacggtggtcacgcaggcaccgtca
tccctagcgaccactctggggacgggtcaggtgatggtggctggactgggcctgtcggcc
gccctgcaaggcgccgcccagttacccaccagcgctagtttcgctgccatggccgggctt
aaccaaggacttatggcgtcatcgcagttcactcctgggggggccttgctgagcttggct
ccaggggggctgggaggggctctgaaccccgccatgttgagcaacagcaccctggccacc
atccaaggtctgtggagcgctctggcatcaggcggtgctctccccatcacctcgctggat
gggagcggtaacctgctgttcgccaacacctccgccggcagcacccccaacctgatgcaa
cccctcttcctgaacccccagaacctgtccctgctcaccaccaaccctgtcaacctggtg
tcagccggagctgctgggggaggggccctgcaggtctcagctgaccaccaggtcaccacg
gcgactgtaccagttcccgcctccaccatcaccactgcctccagggcccagtga
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