Oncorhynchus kisutch (coho salmon): 109870540
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Entry
109870540 CDS
T09179
Name
(RefSeq) SUN domain-containing protein 1 isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109870540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109870540
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
109870540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
HTH_SUN2
Motif
Other DBs
NCBI-GeneID:
109870540
NCBI-ProteinID:
XP_020316671
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All DBs
Position
LG25:complement(12249505..12274107)
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AA seq
1079 aa
AA seq
DB search
MDHSKVNSCAPPPGNTGYTYSHSSSYSTTALDFEKEHRITPVLESPRMSRRSLRLHSTTG
LYGDDSLDSSLNHMYHSASFSAGGASRRDSKALKSRRSQQHSVSCSQSLLLTTPLKSQHG
SQQHNSSLHSVAASDASLLSSMLDKSCIQERTLVEGFWGLDEDSELKERTMTDSMCEANG
GINSAQTQTSMVNGSFCKDRTIHLDRNDALTAYSKHSSTAARSATNKQALTAPAASPSST
IYARDKSRKHRTGERGSHRSTITCVLVSFSDTCVRVSRRAAASVASVFSLLLQSVLLRSR
KEGTGVLWSALDTCLNHSRRAAAFTVCLVTLLIQAAVLKTGSVGRKVVNGAHSSYCGSMN
VNELGTEGKHMNLNGALCDDCKGKQRVETRIVQSSSRVCRSHHVLGELWLATAYSGYLLS
DQTLAYPHTLEMNESSSTFLVPCFLLLGWSPGSSVLWAGQKAGSAVRAVMRRMLSVIWLA
AVSPGKSATGAFWWLGTGWYHLATVMSLLNIFVLTRCLPKLLKLLLILLPFLLVLLALWH
WGPSSLLSVLPAINITEWRTAYSFSQTPLEPTKDSQPIMAQQPPAVSQPGSVLVSVDSER
LARLEQRLAQLWEKVERGGRRQENQHREVLSLYQAVREQLDTQTDKDSMGLWVSGLLEER
LLLLKSGMEKDAALRSELSQEIGEQYVVQQQGQESRLAQLEVLLQTLTAKTEEVQRRQAD
TSSATPALPPVPVQVNVGVDSESRDALLAEVQLLEATLGGIRQDLQGVMGCQGMCDRLDT
LHETVSEQVSAQVRTELRALFSRSEQVGDSQTREKELPESLLQWLSERYVSGVDVHASLT
SLELSILQNVTLQLEKSRARQETHSTETVTQTVMHTVGAAGAGMSEEHVQMIVKNALKLY
SQDRTGLVDYALESGGGSILSTRCSETYETKTALMSLFGLPLWYFSQSPRVAIQPDVHPG
NCWAFQGSHGYLVIRLSMRIVPSAFSLEHIPKSLSPTGTISSAPRQFTVYGLDDEYQEEG
KLLGSYTYQDDEDALQTYPVTEENDKAYQIIEVRVLSNWGHPEYTCLYRIRVHGQPSVN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaccattcaaaagtgaactcgtgtgccccacccccagggaacactggctatacctac
tctcacagctccagctactctacaacagccctggactttgagaaggagcacaggatcaca
ccagtcttagagtctcccaggatgtctcggcggagcctgcgtctgcactccaccactggt
ctctatggcgacgacagcttggactcttctctcaaccacatgtaccacagcgcctccttc
agtgcaggaggagccagtcgcagagattccaaggcgttgaagagtaggaggtctcagcag
cactctgtctcctgctcccagtctctgctcctcaccacgccccttaagagccagcatggc
tcccagcagcacaacagcagcctgcacagcgtggccgccagcgacgcctccctgctctcc
tccatgctggacaagtcgtgtatccaggagcgcacgctggtcgaaggcttctggggcttg
gatgaagactctgaactcaaagagcggaccatgacagacagtatgtgtgaggccaacgga
ggcattaactctgcacagacccagacctccatggtcaacggaagcttctgtaaggaccgc
acgatccacctggacagaaatgacgcgctcactgcctattccaagcactcctcaactgca
gcccgctctgccaccaacaagcaggccctgacagcccccgccgcctcaccttcctccacc
atctacgccagggacaaaagccgcaagcacaggacgggtgagcgaggcagccacagaagt
actataacgtgtgtgctggtgtccttctcggacacctgtgtgcgcgtgagcaggagggca
gcagcctctgtggcgtccgtcttctcactgctcttacagagtgtgctgctgaggtcacgt
aaagagggcacaggtgtcctgtggtcagctttagacacctgtctgaaccatagcaggagg
gcagctgccttcactgtgtgtttagtgactctgctcatacaggctgctgtgctgaagacg
ggcagtgtgggcagaaaagtggttaatggagctcactccagctactgcggaagcatgaat
gtaaatgagttggggactgaggggaaacacatgaatctgaatggtgctctttgtgacgac
tgcaaagggaagcagcgcgtggagacgcgcattgtccaatcctcgtcacgggtctgccgg
tcacaccatgtgttgggggaactgtggcttgccactgcttactcaggttacctattaagc
gatcaaactctggcctatcctcatacacttgaaatgaatgaatccagttcaaccttttta
gtcccttgttttttgttacttggttggtccccaggctccagtgtgttgtgggcggggcag
aaggcaggctcagctgtgcgggccgtgatgaggaggatgctgtctgttatctggttggca
gccgtgtccccagggaagtcggcgaccggggctttctggtggctggggaccggatggtat
catctggccaccgtcatgtcgctcctcaacatcttcgtcttgacacggtgccttcccaag
ctcctcaaactcctgctgattctgctcccattcctccttgtcctccttgctctgtggcac
tggggtccgtccagcctgctgtctgtgttgcctgccattaacatcactgagtggaggacg
gcctactccttcagtcagacccctctggaaccaaccaaagacagccagcccatcatggct
caacagccaccagctgtctcacagccaggcagtgtgctggtgtctgtggactctgagcgc
ctagcccggttggagcagaggctggcccaactgtgggagaaggtggagcgagggggccga
aggcaggaaaaccagcacagggaggtgctgagtctctaccaggctgtacgagagcagctg
gacacccagacggacaaggacagcatggggctgtgggtgtctggcctgctggaggagcga
ctccttctgctgaagagtgggatggagaaggatgcagcactgcggagtgaactgagtcag
gagattggagagcagtatgtggtgcagcagcagggccaagagtctcgtctggctcagcta
gaggtgctgctgcagacactgactgccaagacagaggaggtgcagaggaggcaagcagac
acttccagtgctacacctgcactgccaccagttcctgtgcaagtcaatgtgggtgtggac
agcgagtcccgtgatgccttgctggcggaggtgcaacttctagaggcgacgctggggggc
attaggcaggacctgcagggggtgatgggatgccagggcatgtgtgaccgcctggacaca
ctccatgaaacggtgtctgagcaagtgtcagcccaggtgaggacagaactgcgggccctg
ttctctcgcagcgagcaggtcggagattcccaaaccagagaaaaggagctgccagagtcc
ctgctgcagtggctctctgagcgctatgtaagcggggttgatgtgcacgcctctctgacc
tccctggagctcagcatcctgcagaacgtgaccctgcagctggagaagagcagggccagg
caggagacgcacagcactgagactgtcactcagacggtgatgcacactgttggagccgca
ggggccgggatgtctgaggagcatgtacagatgatagtgaagaatgctctgaaactctac
tcccaggatcggaccggcctggtagactatgctctggagtctggcggcggaagcatcctg
agcactcgctgctctgagacgtacgagacaaagacagcactgatgagtctgtttggcctc
ccgctctggtacttctcccagtctcctcgtgtggccatacagcctgacgtccatccaggg
aactgctgggcgtttcagggttctcatggttacctggtgattcgtctctccatgaggatc
gtgccctctgccttctcattggagcacatccccaaatccctttcgccaacaggcaccatc
agcagcgccccgcgccagtttaccgtctatggtctggatgatgagtaccaggaggagggt
aagttactgggcagctacacctaccaggatgatgaagatgcgcttcagacttatcctgtc
accgaggagaatgataaagcctatcagatcattgaggttcgagtgctgtccaactggggt
cacccggagtacacctgcctgtaccgcatcagagtgcacggtcagcccagtgtcaactga
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