Oncorhynchus kisutch (coho salmon): 109870572
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Entry
109870572 CDS
T09179
Name
(RefSeq) PH and SEC7 domain-containing protein 1
KO
K12494
PH and SEC7 domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109870572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109870572
Membrane trafficking [BR:
oki04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
109870572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
dCMP_cyt_deam_2
Motif
Other DBs
NCBI-GeneID:
109870572
NCBI-ProteinID:
XP_020316731
LinkDB
All DBs
Position
LG25:complement(8357444..8467789)
Genome browser
AA seq
1652 aa
AA seq
DB search
MSQSGKVIHLYVEVRSAPEQDGKGGLGGGVDGLGTGSDSASAQDQPAGLLSQLACQTKCQ
TPSKAPIHRLAHNFTHTQSPSRHKVSFQLHQGNGTQSPSISQQQSLPAALTHSPAFSGIG
KTTTPHKDHHPSKGQGVGGNGKRSVVTFSYIEKANVKTVESPQNSACQRRCGEELSSPPS
HPRNKLSDPIWLGSPGSSCSSSPKLAFRPPGGHQQQPTGSPSLRHPVLDPVGIAATQRAL
EEFGFGSPLFRSKIIHGLEQSPRGSRHNQQARCLSWAGGSPVQHHSACNNLHNNHAVDAD
RNRAICGPLPRSSASVQLSSHARQGTLGMSPYSRPRSCMGLQAQSPHHWVGQDKALAGSP
ATQRQVHKPCNSSSSSQGTILQLKNKLGERTVLNQLSCSKPSSPANSPEVARRLAEEATK
VSSILAEVKRNSLTLHNALDEVERPNSECMSGEADSSVSNVQRQHLQHQTVKMNIPLHGQ
HTPASNDIDSHRAGNVLASSRTQDSNSPTTTNHGTQHGRGQAQSSILSDTVVGVGGSPAL
PSRFIRPSLPPAETSSPLKDPRLLRAQLRVTESPTLHRCQPPQYTRDFWSFEPDERADFS
CFDTGDSAELARRLYIRQSVVEAPVSWTSRQPWSHLVEEESRNSSSSPIHGPGQQPLSVA
QQKRAEHRRREVLLLGPVVLDSPEEDEGLNGDGEEVHRPGQQRGLLRVEEPPEGEQIRVA
GSSSRSSSGVTGSLGERDCVSPESSQSSHQSNDTGAATSGIQTDSGSAVPGPSLHSQRIA
RAKWEFLFGNPAEEDASRGEKNTIEASTAPPSGQSSESPTPTPPTSLPLISANHEVQHVE
VELVTPHPAVAGASPKTGIIRMTLKYSETDLDAVPLRCYRETDIDEVLLAEQEDADSAFG
SNRSVKSTSGTDSSPLGVCPYESTSAEEEVEGEEEEEELEEEEVVSWASVRMQGDIKRQQ
QQQVISQLLKRPLDSFFDNLPALKSPVLLSGPRLAGTSEDSFSHHFESIMESHRAKGTSY
GSLDLDSEELLTSSTQTVLTFDLPTLTPEIQGGQMICQSARQIVKLSFAPLAHCERGTSL
SDSIVTVTGDSDATRAPSSERLSSSPDDTPLRGGGGGARMLGSSWYSNPTFSFPREKARL
ATDSELDQDLSELLGLGSNDTLTNGNRANGEAAKRLAKRLFTLDGFRKSDVARHLSKNND
FSCMVAEEYLHFFNFKGLAVDQALRAFLRQFSLMGETQERERVLAHFSRRYLHCNPKLIP
SEDGVHTLTCALMLLNTDLHGHNIGKRMSCTQFIGNLEGLNEGQDFSKDLLKALYNSIKN
EKLQWTIDEEEMRKSFSELGDTSQADSASKHMKSMASGGKPLVAMAQPSGALLYKNGFLV
RKVHADSDGKRTPRGKRGWKTFYGILKGLILYLQKGEYRPDKQLSDEDLKNAVSIHHSLA
MRAADYSKRPNVFYLRTADWRVYLFQAPSTEQMQSWITRINTVAAMFSAPPFPAAIGSQK
KFARPLLPSSTSKLSQEEQVQSHETRFRAISTELAELRSYPPDRKVKGRELEEYRQRDEY
LEFEKTRYGTYAMLLRNKIRCGEDDLSVFEVQILEDNGLQRAHSSPTLQDFSQASQASQG
SSTKEPVGCSGMGKGSKHTEAQRYSYRQAVKK
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtcattcatctgtatgtggaggtgaggtcagccccagagcag
gatgggaaggggggcttgggaggaggagtggatgggcttgggactgggagtgactccgcc
tcagcacaggatcagccagcggggcttttgtcccagctagcctgccagacaaaatgccaa
actcctagcaaagctccaatacaccgcctggcccataacttcacccacacccagtctccc
tccagacacaaagtgagcttccagctccaccaaggtaatggcacccaatcgcctagcatc
tcccagcaacagagtttaccagcagcactgacccactccccagccttttctgggattggg
aagaccaccaccccacacaaagatcaccacccctccaaagggcagggggtggggggcaat
ggcaaacggtcggtggtcaccttcagctacattgagaaggctaacgtcaagacagtggag
agcccacagaactcagcctgtcagaggaggtgtggggaggagctgtcgtccccaccttcc
cacccccggaataaactcagcgatcccatctggttgggtagtcctggctcctcatgcagc
tccagtcccaaactagcgtttcgtcccccagggggtcaccagcagcagccgacaggctcc
cccagcctccgccaccctgtcttggatcctgtcggtattgcggccacccagcgtgccctg
gaggagtttgggtttggttcccccctgttcaggagtaagatcatccatgggctggagcag
agtcccaggggctcccgccacaaccagcaggcccgctgcctgtcctgggccggcggttct
cctgtccagcaccacagcgcctgcaataatctccacaataatcacgctgtggatgcagat
agaaaccgggctatttgcgggccattacccaggagctcagcctctgtccagctttcgtcc
catgctaggcagggcactctgggcatgtctccttactcaagacccaggtcgtgcatgggg
ctccaggcccagagcccacaccactgggtaggtcaggacaaagctttagcaggtagtcca
gccacacagagacaagtgcacaagccctgtaacagtagttcctcctctcaagggaccatc
ctccaacttaaaaataaactaggggagagaactgtactgaatcagctaagttgtagcaaa
ccctcctccccagccaacagccctgaagtggcccggaggctagccgaggaggctactaaa
gtatcctctattttagcagaggtaaagaggaactcattgacattgcacaatgctttagac
gaagtagagagacccaactctgaatgtatgtctggagaagctgacagttctgtctcaaat
gtacaacggcaacatttgcagcatcagacagttaagatgaatatccctttacacggccaa
cacacaccagcgtcgaacgacattgactctcaccgggctggaaatgttttagcatcgtca
cgcacacaggactcaaactctccaacaacaaccaatcacgggacacagcatggaagaggg
caggctcagagctccattctatcagacacagtagtgggtgtaggagggtcccctgccctg
ccttcacgcttcatccgtccatctcttcccccagccgagaccagctcccctctgaaagac
cccaggctgctgagagcccagctcagagtcacagaaagcccaacactgcatcgctgccag
ccccctcagtacactagagatttctggtccttcgagccggacgagagagccgacttctcc
tgctttgatacgggggatagtgccgagctggcccgtaggctctatatacgccaaagtgtg
gtggaagcccctgtcagctggacctccaggcagccctggagccacctggtagaggaggag
agcagaaactccagttccagccccatacacggacctgggcagcagcccctaagcgtggcc
cagcagaaaagagccgagcataggaggagggaggttctgctgctgggccctgtggtgctg
gactcgccagaggaggatgagggcctgaatggggatggggaagaggttcacagaccaggg
caacagcgaggcctgctgagggttgaggagcctccagagggggagcaaatcagggtagca
ggatcctcatcacgcagctccagcggggtgaccggtagcctgggggaaagggactgtgtg
tccccagagtccagtcagtccagtcaccagagcaacgacacaggggctgccacctcaggg
atacagacggacagtggttctgcagtcccaggcccctccctccactctcagaggatagct
cgtgccaagtgggagttcctatttgggaaccccgctgaggaggatgccagcaggggggag
aaaaataccatcgaggcctcgacagctcctcctagtggccagtccagtgaatcccccact
cccacgccccccacctccctccccctcatctcggctaatcatgaggtgcagcatgtggag
gtggagctggtgactcctcacccagctgtggcgggggcgtcgcccaagacgggcatcatc
cggatgaccctcaagtactcggagacggacctggatgccgtgcccctgcgctgttaccgc
gagaccgacatcgatgaggtgcttttggctgagcaggaagacgccgactcagcatttggc
agtaaccgtagcgtgaaaagcacgtcgggtacagacagcagccccctgggtgtctgtccc
tatgagagcacaagcgcggaggaggaggtggaaggagaggaggaggaagaggagctggag
gaggaggaggtggtgagctgggcctcagtgaggatgcaaggggacattaagagacagcag
cagcagcaggtgattagtcagctgctgaagaggccgttggacagtttctttgacaacctc
ccggccctcaagtcgcccgtcctgttgtcggggcctcgcctcgcaggcacctccgaggac
agctttagccaccattttgagagcatcatggagtcacaccgcgccaagggcacgtcctac
ggcagcctggacctggacagtgaggagctgctgacctccagcacacagaccgtcctgacc
tttgacctccccacgctgaccccagagatccaggggggtcagatgatctgtcaaagcgcc
cggcagattgtcaagctgagcttcgccccattggcccactgcgagagggggacaagctta
tcagattccatcgtcacggtgacgggagactcggatgccacgcgtgccccctccagtgaa
aggctgagtagtagcccggatgacacgcccctgagagggggagggggcggggcacggatg
ctggggagcagctggtacagcaaccccacattctccttccctagggaaaaggctcgtctg
gcgacagactcagagctggaccaggacctcagtgagctgctgggcctggggagcaacgac
accctcaccaatggtaaccgtgccaacggggaggccgctaagcgcctggccaaacgcctc
ttcaccctggacggcttcaggaagtccgacgtggcccgccacctcagcaaaaacaatgac
ttcagttgtatggttgcagaagagtatctacacttctttaacttcaagggtcttgctgtg
gaccaagctctgagagcctttctcagacagttttccctgatgggggagactcaggagaga
gagcgggtgctggctcacttctccaggagatacctgcactgtaaccccaaacttataccc
tctgaggatggtgtccataccttgacctgtgccctgatgctgctaaacacagacctgcat
ggccataacattggcaaaaggatgtcctgcacacagttcattggcaacctggagggtctg
aatgagggtcaagacttttccaaagaccttctgaaggccctgtacaactcaatcaagaat
gagaagcttcaatggacaatcgacgaggaggagatgcggaagtctttctcagagctgggg
gacaccagccaggcagactccgcctctaaacacatgaagagcatggccagcggcgggaaa
ccactagtggccatggcccagccctcaggagccctgctgtacaagaacggcttcctggtg
cgcaaggtgcacgctgactcagacggcaaaagaacaccgcgtgggaaaagaggatggaag
acgttctatggcattctgaaagggctgattctctacctacagaagggagagtaccggcca
gataagcagctgtcggacgaagatctgaagaacgctgtgtccatccaccactctctggcc
atgagggctgccgactacagcaagagacccaatgtgttctacctccgcaccgccgactgg
agggtctacctcttccaggcaccaagcacagagcagatgcagtcgtggatcacacgcatc
aatacggtagcagccatgttctcggcgccacctttccctgcagccattggttcacagaag
aaatttgcccgacctctgctgccaagctccacctccaaactgtcacaggaggagcaggtc
cagtcccatgagactcggttccgggccatctccactgaactggctgagctgcgctcatat
cctccagaccgaaaggtcaaaggccgcgagctggaggagtaccgccagcgagacgagtac
ctggagtttgagaaaacacgctacggtacatatgccatgctgctgcggaacaagatccgc
tgcggcgaggatgacctgtccgtattcgaggttcagatcctggaggacaacgggctgcag
cgcgcccattccagccccacgctgcaggacttcagccaggcaagccaggcctcccagggc
agcagcaccaaggagccagtgggctgcagtggcatgggaaaaggctccaagcacaccgag
gcccagagatacagctaccgccaggccgtcaagaagtga
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integrated database retrieval system
