Oncorhynchus kisutch (coho salmon): 109870814
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Entry
109870814 CDS
T09179
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109870814
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109870814
Endosome - Golgi transport
Rab GTPases and associated proteins
109870814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
109870814
NCBI-ProteinID:
XP_020317041
Ensembl:
ENSOKIG00005030257
LinkDB
All DBs
Position
LG26:complement(30564038..30580949)
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AA seq
1140 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFILQRRRGHGDSGGKFTGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWTIACGAAVEDMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGKQAAQEEDPEKFREVLLKFELRFGLPSSEKLVTTYSCCCWKGRVPRHGWLYL
SINHMAFYSFLLGKEVKFVIPWVELTRLEQVSTGLMTDMVRVTTRRRQRDFSMFLSLDEA
FGVMGQLADIALRRLLDSGGLELDQVLQQSSNITKRVLEEQALRAYVLALFRLPRAECLQ
EVALCSVWTPHARCHTAGTLYTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDSLMSRLRALQWKHSMFHSKKSLTSSSPYYTFYYDT
MYCDGEEIEERPLRHTVNTEALMAYYHHSQPDLNNSTATMEQVKERLWDDHFSAYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDSSSELASHPDYYSGLVTESIGHSSLATEEIE
RDLHRSLPDHPAFQNVTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFW
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIQERLPELAEHIPDLSPLSSLSLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANAAALCASADDGQALMILTGFLDHV
KYDENPSPPAPHPPSSPRGEEECSTTVELHTLITDLIIDSYEKFGDLTVRQLERLRCRHR
IQVLQAHEDITKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGSTTVALQHHD
PGQPYVEQYRVDRAQFKSLYVLLVPWLCGLHTDTVAHRTFTLLDQDKDLLITFRKFAGWL
DTLYCEELNEKIRLLYRLHIPPALTESEDDSPPLKSPLLSTTRPLHIEMPNAPVCVHVEE
EIRDYQEQLKQMLKDLAQEKNVEKPLPLMNQREFIQFCKTLYSMFHGNPDENELFQAIAT
VTSLVLQIGEVGHRSRSEVSSEGGAGDEDHREGGQEDHPVFSTKEGDGERQEGTRKSSER
SESSSEWTVSYAQILASLLTEQQLVNFFEKPLDLSAKVAVAKVKQYHERAGLLMLQQGTS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccagaggaagttttgctgaaaaacgcgctgaagctttgggttaccgaa
aaatcaaacgatttcttcattttgcagcgccgaagaggacatggggattcagggggaaaa
tttacaggtcttctggtgggagctctggacacagtgctggactccaacgcccgggtcaca
ccattccgtatcctgctacaggtgcctgggtcacaggtcagctggactatagcttgtggt
gctgctgttgaggacatgaacaggcattgggactggctggtccagaatctactccactct
ctctcagtatttgagaacaaggaggatgtcgccagcttcgtcaaagggaaagtcaagggt
ctgatagcagaggaggtgagggggaagcaggcggctcaagaggaggacccagagaagttc
cgggaggtactgctgaagtttgagctgcgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaagggacgcgtcccccggcatggctggctctacctc
agcatcaaccacatggccttctactccttcctgctgggaaaggaagtgaagtttgtgatc
ccgtgggtggagttgacgaggctggagcaggtctccactggcctcatgacggacatggtg
cgtgtgacaacgcggcggcgccagcgggacttctctatgttcctgagcctggatgaggca
ttcggggtcatgggtcagctggctgacatcgcactgcgacgcctgctggacagcggaggt
ctagaactggatcaagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcattgagggcgtacgtcctggctcttttccggctaccgcgggccgagtgtctccag
gaggtggctctgtgttcagtgtggacgccccatgcacgctgccacacagctggaacactc
tacaccaccgacagctacctatgcttcgccagtcgagaggagggccactgcagcctgctc
atccccctttcagaggtgatctccatagagaaggctgagagcaccagcctgctgcccaac
ccagtgatcgtcagtgtgaggagtaagaaggccttccagctgatcgagctgcaggacaga
gacagcctggtggatagtctgatgtcacggctcagagccctgcaatggaaacactccatg
ttccacagcaagaaatctctgacttcctcgtctccctactataccttctactatgacacc
atgtactgtgacggggaggagatcgaggagagaccactacgtcacacagtgaatacagag
gctctgatggcatactaccatcactctcaacctgacctcaacaatagcacggctaccatg
gagcaggtgaaagagcgtctgtgggatgaccacttctctgcgtatggtcgaggtgtccac
atgttccgcacagagaagatccagaagctggttgccatgggaataccagagtcgctacgg
ggagagctatggatgaccttctctgactcatcgtcagagttggcttcccacccagactac
tactcggggctggtgacggagtctatagggcacagcagcctggccacggaggagatcgag
agagatctgcaccgctcgctgcccgaccaccctgccttccagaacgtcacgggcatcgct
gccctacgccgcgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcaatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctgg
ctgctggtggctgtgtgtgagagaatgctgcctgactatttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccaggagcgtcttcccgagctggct
gagcacattcccgacctctcccccctctcttccctctccctgtcctggttcctcaccctc
ttcctcagtgtgcttcccttccgcagcgccgtctgtgtggtagactgcttcttcttccac
ggcatcaaagccatcttccagctagggctagctgtgctggatgcgaacgctgcggcactg
tgtgctagtgcagatgacggccaggccctcatgatcctcactggctttctggaccacgtg
aagtacgatgagaatccgtctccacctgcccctcaccctccctcgtctccgaggggggag
gaggagtgcagcacgactgtagaactacacaccctgatcacagacctcatcattgactcc
tatgagaaatttggagaccttacggtgagacaattagagcggttgcgatgcagacaccgg
atccaggttctgcaggcacacgaggacatcaccaaggagaacgcactcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagag
cacttcatcaacctgtactggggtgatgggagcaccactgtggctctccagcaccatgac
ccaggccagccctatgtggagcagtacagagtggaccgggcccagttcaaaagcctgtac
gtgctactggttccctggctgtgtggcctccacactgacaccgtggcccacaggaccttc
acactgctggaccaggacaaagacttactcatcaccttcagaaagtttgccgggtggctg
gacacactatactgtgaggaactgaatgagaagatcagacttctgtatcgtttgcacata
cctccagctctgactgagagtgaggatgactctcctccactgaagagccctctgctgtcc
actaccagaccactccatatagagatgcctaatgctcctgtgtgtgttcatgttgaagag
gagatcagagactatcaggagcagttgaagcagatgttgaaggacctggctcaggagaag
aatgtggagaaaccgctacctctaatgaaccagagggagttcatccagttctgtaagacc
ctctacagcatgttccatggcaacccagatgagaacgagctctttcaggccatcgctaca
gtgaccagcctggtgctgcagatcggtgaggtcggccaccgcagccggtcagaggtcagc
agcgagggcggagccggagacgaggatcacagggagggaggtcaagaagaccaccctgtc
ttcagcaccaaagaaggagatggagagaggcaggaggggaccaggaagagttcagagcgg
tctgagagttcgagcgagtggacggtcagctacgctcagatcctggcctcgctcctcaca
gaacagcagctggtcaacttctttgagaaaccactggacctgtcagcaaaggtggctgta
gcaaaggtgaaacagtaccatgaaagggccggtctgcttatgcttcagcaaggaaccagc
tga
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