Oncorhynchus kisutch (coho salmon): 109870895
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Entry
109870895 CDS
T09179
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109870895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109870895
03110 Chaperones and folding catalysts [BR:
oki03110
]
109870895
03029 Mitochondrial biogenesis [BR:
oki03029
]
109870895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109870895
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109870895
Messenger RNA biogenesis [BR:
oki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109870895
Chaperones and folding catalysts [BR:
oki03110
]
Heat shock proteins
HSP60 / Chaperonin
109870895
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109870895
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109870895
Exosomal proteins of other body fluids (saliva and urine)
109870895
Exosomal proteins of breast cancer cells
109870895
Exosomal proteins of colorectal cancer cells
109870895
Exosomal proteins of bladder cancer cells
109870895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
109870895
NCBI-ProteinID:
XP_020317177
Ensembl:
ENSOKIG00005020599
LinkDB
All DBs
Position
LG26:complement(37785758..37793027)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVCRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQNRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGQVGEVSVTKDDTMLLKG
KGDTASIEKRQAQIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINSDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacggtgatgagacagatgaggccagtctgcagggccctggccccc
cacctcacccgagcctacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggtcccaagggtcgc
acagtaatcattgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccattgacctgaagtgcaagtaccagaacatcggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcaggagatggcaccactaccgccaccgtgctggcc
agagccatcgccaaggagggctttgacaccattagtaaaggcgctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcattgctgaactgaagaggatgtctaag
ccagtcaccacacctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaaaaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaactctgcatgatgagcttgagatcattgaggggctgaagttcgac
cgcggctacatctcaccttacttcatcaacacagccaaaggccagaagtgtgagtttcag
gatgcttatgtgttgctgagtgagaagaagatctccactgtccagagcatcgtccctgcc
ctggaattggccaaccagaaccgcaaacctctggtcatcgtggctgaggatgtggacgga
gaggccctcagcaccctggttctcaacaggctgaaggtgggactacaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcacgacatggccgtggccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcacat
gactttggccaggtgggcgaggtgtcagtgaccaaggacgacaccatgctgttgaagggg
aagggagacacggcatccatcgagaagaggcaggctcagatcgctgagcagctggagaac
accaccagcgattacgagaaggagaagctcaacgaaaggctggccaagctgtctgacgga
gtggctgtgctcaaggtgggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccgggggt
ggctgtgcactgctgcgctcaatccctgccctggatgccctcgtgcccatcaactctgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccggccatgacaattgct
aagaacgctggtgtggagggctctctagtggtagagaagatccttcaggccgcggtggag
atcggctacgatgccatggaaggagagtacgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactaatggatgctgcaggtgtcgcatcccttctctcc
actgctgagtgtgtggtcacagagctgcccaaggaggagaaggagggtggcatgccagga
ggtatgggaggtatgggcggtatgggaggtatgggcggtggcatgttctaa
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integrated database retrieval system
