KEGG   Oncorhynchus kisutch (coho salmon): 109870909
Entry
109870909         CDS       T09179                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03410  Base excision repair
oki04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109870909 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109870909 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109870909 (parp4)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109870909 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA VWA_2 WGR-like_PARP4 PARP_reg CobT_C
Other DBs
NCBI-GeneID: 109870909
NCBI-ProteinID: XP_020317194
LinkDB
Position
LG26:26349538..26382545
AA seq 1774 aa
MSEEAVEVYQTLRKELQVRGLTLRTTLPPEAPDLGSASLQQLLLEEKLSCSSLSQEVGVF
VELLWAEALGCLDNVLKVPITSLSLNDVSRAEGLLLQVQRKLRARQGEGPDTDVASLMEE
VYTLLPHKTDLSHLPLHTKLISSQLDLCQLIRDVLNVSEATLRSPIPSCLGKYRALRCSI
ERVPSGPEFLYVTELLQDRQVQILQVLRVNRGVELQMFREELGNVKPLLHSSSPSSFVGI
LSRGLLLPRVGVEHHGIERTDIGNLGGGIYFSDSISTSLKYSKPSVTDGSRLLLVCDVAL
GRCTDLQKRDSSLTHSPEGYHSVHGVRHTPKKPSEFDDDEYVVYSPEQVRLQYVVQFRLE
EDQLKDFQPTIDTSSTELPLPVSPSDLLSCCEAEEDVGSCKNPLEEVTAGLLDCSGQPLP
LQAVHVRARLMDLLSQVIIFQTYTNQSTAPIEAKYVFPLDDSAAVCGFEAFINGKHVMGQ
VKEKQQARKEYKQAIERGHGAYLMDQDAPDVFTISVGNLPAGATVLIKVTFVTELVVMEG
LINFSLPGSVAPWQQSSALNQRTQVTLEKVCVTNLDSQGEFSLDMSIEMPNEIINLHCLT
HKVKIKRTDCKAVVRTCPGETLGPDGFLVCFSLAQIHLPRMWVEKHPDKDSQACMLVFYP
DFEPCPTSSPMSGSSEVILLLDSSESMRGEALQNARRIALQLLNTLDHHSIRVNVISFGS
DQKDAFLSANPLIEALQPAKKFIMSSSPVGGSTELWRPLRSLSLLPPSQGVRNLLLLSDG
HVQNQALTLQLVRQHAQHSRLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKTKHTWREK
VACQVKRIVSPGCSSVSVKWQQFNPSAPPPVQAPSQLHALFTDCHTLVYGFVPHCTQATL
LGDLSGQNIETMVSTTELQKTRGTFLHKLTARAVIRDYEDGSLHTNEAEHEGKKSVMKSF
IIELSKEFSILSQFTSFVAIEERDSEQPDVGFTDVPKLISDEDVDFLPYLSWQQEEYEGD
GMDSGSDSMSNLLNGGPGHVLCRNICLEERGMGEEHESMVQLQVDDESWEGSVNLRSKFL
NQRATDDVPLGRTLNSSYFMGSMVFASPGTLSAATEPLDMTLKIEGAVTDEEMECFDDMV
FDLQESEHPLRGSVIMHSEALSSSFSPTLHTLSGSQCIPDTTYLSTTMVPMAMETDFIPE
LSDTFYSLPNIVRRAKSREGDFRRADRHRKVCDGPAFDPVETQKKSLSVADVPRPPPSVH
HLQIKSCVVADVLPPPPPASALSSPGPRPSRLQSFFATVSDALPPPPPAPVLCSPCPPPF
RPQSFSARGSGSLPPPSALVSNEFRAIRYEMGVHARPGVGAISHTATFPKLRAVGDLLLS
KPREPYPVELSSMCETSKMCLLDNSLSEYKDCGLVEIDHWQPSVVPASVPPSGFGFGGRR
AGSQSRQPHSSLFGATASACYIPGLYEASSAGGPPLGGSARSMGLSFEAPLTGGHLSSLS
PTTHGAYLTQSLGALVGSSQFGSSLNTLQQHHVLPQAQKPLDMKKNIQKLVGDSERYVSA
SVRPSLCLSVYDLYWRHVLLCVALWYPNEVGFDFRRGGLEFRKRGLEFRKNTLDVVKWTE
IFALQHSEGYWECSASLGYLLGVDVDYFANVFLKNRGISSLGVRAHADILRLVASLLVLQ
LMRVRRLDEGKLLLSLFRLDLDHSPPQPRCERWEAVRRAVDWVCWADREYPCVCSRLEFG
WDWESSTRQLLGIDPPHPLSPLILLGTTGGVRAQ
NT seq 5325 nt   +upstreamnt  +downstreamnt
atgtcagaggaggctgtggaggtctaccagactctcaggaaggagctgcaggtcagagga
ctcacactgaggaccaccctccctccagaggctccggatctgggctctgccagcctgcag
cagctgctgctggaggagaagctgagttgcagcagcctatcacaggaagtgggcgtgttc
gtggagctgctctgggcagaggcccttggttgtctggacaacgtcctcaaggttccaatc
accagcctcagtctcaacgacgtgagcagggctgaggggctgctgctacaggtccagagg
aagctgagggcgagacagggggaggggccagacactgatgtggcttctctaatggaggag
gtctacaccctcctgccacacaaaactgatctgtcccatctccctctccacactaaactc
atctcatcgcaactggacctctgccagttgatcagagacgtgctgaatgtgagcgaggca
acactgagaagccccatcccttcttgtctggggaagtaccgcgccctgaggtgtagcatt
gaaagagttccctctggtcctgaatttctgtatgtcaccgaacttctacaggacagacag
gtgcagatcttgcaggtgctgagagtaaacagaggggtagagctacagatgtttagggag
gagctggggaacgttaagcccctcctccactcctccagccccagcagctttgtggggatc
ctgtctcggggtctgttgctgcccagagttggagtggagcatcatgggattgagagaaca
gacattgggaacttgggcggtggcatctacttcagtgattcaatcagtaccagtttgaag
tactctaagcccagtgtgacggacggcagtcggctgctgctggtgtgtgacgtggcgttg
gggcgctgtactgacctccagaagagggacagcagcctgactcactcccctgagggatac
cacagtgtacatggggttcgccacacccccaagaaaccctcagagtttgacgatgatgag
tatgtggtgtacagcccggagcaggtgaggctgcaatatgtggtacagttcagactggag
gaggaccagctgaaggacttccagcccaccatagatacttcttctaccgagcttccgctt
cctgtctctccgtctgacctcttgtcctgttgtgaggctgaggaggatgttgggagctgt
aagaaccctctagaggaggtgactgcaggcctgttggactgctctggacaaccactcccc
ctacaggccgttcatgtcagggccaggctgatggatctgctctcccaggtcatcatcttc
cagacatacaccaatcagagcaccgcccccatcgaagccaagtacgtcttcccattggat
gattctgctgctgtgtgtggttttgaggccttcatcaatgggaaacatgtaatgggacag
gtgaaggagaagcagcaggcgcgtaaagagtataaacaggccatagagagaggccatgga
gcttacctaatggaccaggatgcacctgatgttttcaccatcagcgttgggaacctgcct
gccggtgccaccgtccttatcaaagttacctttgtcaccgagctggtcgtcatggagggc
ttgatcaacttctcattgcccggtagtgtggcgccatggcaacagagctcagcgctcaac
cagaggactcaggtgactttggaaaaggtgtgtgtgaccaacctggattcccaaggggag
ttcagtctggatatgtccattgagatgcccaacgagatcatcaacctgcactgtctcaca
cacaaagtcaagatcaagaggaccgactgtaaggcggtggtgaggacatgtccaggtgag
actctgggtccagatgggttcctggtctgcttcagtctggctcagatccacctacccagg
atgtgggtggagaaacacccagataaagacagccaggcctgtatgctggtattttaccca
gactttgagccctgccccacctccagccccatgtccggctccagtgaggtgatcctgctg
ttggactcgtctgagtccatgagaggagaagctctccagaacgccaggagaatcgccctg
cagcttctgaataccctggaccaccacagcattcgagtcaatgtcatctcctttggctca
gaccagaaggatgcttttctctctgccaaccctctaatcgaggccctccaaccagccaag
aagttcatcatgtcctcctcacctgttgggggcagcactgagctgtggaggcccctgcgc
agcctgagtctgttgcctccgtcgcagggcgtaaggaacctgctgctgctatcagacggt
cacgtccagaaccaagccctgaccctgcagctggtcagacagcatgcccagcacagccgc
ctcttcacctgcggcctcagcccaacagctaatcggcacatgttgcgggccctggcccag
gcagggggaggggcctatgagttctttgacacaaagacaaagcacacctggcgagagaag
gtggcgtgccaggtgaagcgcatcgtgtctccaggctgcagctctgtgtctgtgaagtgg
cagcagtttaacccctcagctcccccccctgttcaggcgccctctcagctccacgcactc
ttcactgactgccacaccctggtctacggcttcgtgccacactgtacacaggccactctt
cttggagacctgagtggtcagaacattgagacgatggtgtccaccactgagctacagaaa
accaggggcacgttccttcataagctcacagcgagggccgttatcagagactatgaggat
ggaagtcttcacaccaacgaggctgaacatgaggggaagaaatcagtgatgaagtccttc
atcattgagctgagcaaagagttctccatcctgtctcagtttaccagctttgttgccatc
gaggagagggactcagagcagcctgacgtgggcttcacagatgttcccaaactgatctca
gacgaggacgtcgacttcttaccttaccttagctggcagcaggaggaatatgagggagat
gggatggactcgggatcagactcaatgtcaaacttgctgaatggtgggccagggcatgtt
ttatgcagaaatatctgtctagaggagagggggatgggggaggagcatgaatcgatggtt
caactccaggtggatgacgaatcatgggaaggatctgtgaacttacgttccaaatttctc
aatcagagggctacggatgatgtgcctcttggtaggacacttaattcctcttacttcatg
ggctctatggtttttgccagcccaggtaccttgtccgctgctaccgaacctctagatatg
actttgaagattgaaggagctgtgacggatgaagagatggagtgctttgatgacatggtc
tttgatttacaggaatctgaacacccccttcgtggctcagtaatcatgcatagtgaggct
ctgtcctcttctttctctccaactctccacacgctttcaggcagccaatgcataccagac
accacatacctttctaccactatggtgcctatggctatggagacggatttcatccctgag
ctgtctgataccttctactctctcccaaacatagtgaggcgtgcgaagagtagagaggga
gactttagacgggcggacagacacaggaaggtttgtgacggtccggcatttgaccctgta
gagacacagaagaagtctctctctgttgctgatgtgcctcgtcctcctccctctgttcat
catcttcagatcaagtcttgcgttgttgctgatgttcttcctcctccaccccctgcttct
gccctcagttctcctggtcctcgtccatctcgactgcagtctttctttgccacagtttca
gatgctcttcctcctccaccccctgctcctgtcctctgttctccttgtcctcctccattt
cgacctcagtctttctctgccagaggttcaggttctcttcctcctccctctgctcttgtc
tccaatgagtttcgagcgattagatacgagatgggagttcatgccagacctggagttggg
gctatctcccatactgcaaccttcccgaaactgcgagccgttggggacctgctactttcc
aaaccccgagagccctatcctgtggaactgtcgtcaatgtgtgagactagcaaaatgtgt
ctcttggataatagcttatccgaatataaggattgtggactagtggaaatagaccactgg
caaccttctgttgtccctgcctctgtgcccccatcagggtttggtttcgggggcagaagg
gcaggttctcaaagcagacaacctcacagctctttgtttggggccacagccagtgcatgt
tacattccaggtttatatgaggcttcttcagcaggcggaccacctcttggaggctcagct
agatcaatggggttaagttttgaggcaccacttactggcggacacctcagctccctttca
cctaccactcatggcgcctatctgacccaatctttaggggccttagttggatcctctcag
tttggtagctctctcaatacactacaacaacatcatgtactaccacaagcacaaaaacct
ctggatatgaaaaaaaacatacaaaaacttgtcggagacagtgaaaggtatgtgtcagcg
tccgttcgtccgtcactttgtctgtctgtgtatgacctctattggagacatgtattgtta
tgtgtagctctgtggtatcctaatgaggtaggttttgatttcaggaggggaggtcttgaa
ttcaggaagagaggtcttgaattcaggaagaatactcttgatgtagtaaaatggacagag
atttttgccctccagcactcggaaggttactgggagtgctctgccagcctgggctacctc
ctcggtgtggatgtggactactttgcaaatgtcttcctgaagaatagaggcatcagctct
ctaggtgtgagggcccatgctgacatcctgaggctggtggccagtctgctggtgctgcag
ctgatgagggtgaggaggctagatgaggggaagctgctgctcagcctgttccgtctggac
ctggaccactctcctcctcagcccaggtgtgagcgctgggaggcagtgaggagggcggtg
gactgggtgtgttgggcagacagggagtacccgtgtgtgtgcagcaggctggagtttggc
tgggactgggagtcgtccacacggcagctcctgggcatcgaccccccgcaccccctctct
cccctcatcctcctcgggaccacagggggagtgagggcccaatga

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