Oncorhynchus kisutch (coho salmon): 109870946
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Entry
109870946 CDS
T09179
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109870946
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109870946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109870946
NCBI-ProteinID:
XP_020317254
Ensembl:
ENSOKIG00005008817
LinkDB
All DBs
Position
LG2:71972194..72000014
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AA seq
1107 aa
AA seq
DB search
MRLPVICFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGTKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPGYM
LELPENSPPGRMLIDVNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPKTGVIKIQGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTIYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLLINDTVEIMVPRNVGLGYIVTTVRAVDQDHGESGRLTY
EIWEGNEEHLFEMDPVTGEVRTAHSVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKANT
GAMAAGEPSASGDQQHWDMSLPLIITLCIISLMLLAVMTTIAVKSKHQDKEAGNYNCRMA
EYSNSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMNVVSSPSLITSPICFDYQATSP
LPLTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMDRMSVIQTDNFPSEPNNVAN
RQPFAQSSSTFKDAERASLRDSGHGDSDQADSDLDTNKGCACNTSARGALKMKATAVNGQ
PLDQGQGRSVHCTDECRALGHSDRCWMPKLRVGGQADSGDNRTDLFIPVGMEATAETEIY
GSLNRSAARKTLSTFGKEQRDSTILVANIKPYFKSQRARSPLLQECSSGSSSPTKGNTPL
DSHTKGPREEVGRDGEGGSDSSAYGPPDGQCSPPHTELEEPSYMACGLTPKSLSNSLIHS
SEIRSGIISQECVGMECVSPNQRDSGD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtcatatgtttccttctcttctgggctaaagcccggacactgaaaaat
ctaaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggaccggtggagaaaggaaccaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgg
attgacagggagacattgtgcaaacgcaaccctaagtgtcagctctctatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccctcagatcacatcaatattgatatttcagagaacgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctgggcaaaacggaataaagacttat
caggtcaccagagatgattacaatacattttctttggacttgaaattgagaggtgatgga
accatatatcctgaattggtggttcagcgccctctagatagggaagatcagtctcatcac
accctccttttgacagccattgatggaggggagtatccaagatcagggtccatgcaaatc
aatgtgagagttactgattcaaacgataatagcccagtatttgacaaacccggctacatg
ctggagcttcctgaaaactcaccgcctgggagaatgctgatagatgtgaatgcaactgat
caagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatccgataga
gtccaagagttgttttctattgatcccaaaacaggtgtcattaagattcagggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctggggcctaac
cccatacctggccattgtaagatttcagtcaaagtgcttgacaagaatgataactggccc
gttataagttttgtctccgtccgccagggagctatcagtgaggcagcgcctccagagtct
gtcatcgccctggtgagagtcactgataaggattctgggaggaatggccagctccagtgc
agggtgcttggcaatgtaccattcaggctgcaggaaaacaatgataatttttacactctg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaacggaataccttcgttgaattacaccaaatcatttacagtgaaaatcttagat
gagaatgataatgcaccacgtttcaccaagaccatctatgtgctccaggtgcctgagaac
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagtttacacctac
gtgtctgtcaatcctaccaacggagccatatacgcctcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcagggtctcctcatatggagggc
agtgccacagtcagagtcagtgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctcctgataaatgacactgtggaaatcatggtccctagaaatgtaggtctggggtac
atagtgaccacggtgagagcggtcgatcaggaccacggggagagcggtcgtctgacctac
gagatctgggagggtaacgaggagcacctgtttgagatggaccctgtgaccggcgaggtg
aggactgcccattctgtgtgggaggacgtggccccagctgtggagctggtagtgaaggta
accgaccacggcaagcccccactgtctgccgtggctaagctgatcattaaggccaacaca
ggagccatggcagcaggggagccaagcgccagcggggaccagcagcactgggacatgtcc
ctgcccctcatcatcaccctctgcatcatctccctcatgctcctggctgtcatgactacc
atcgccgttaagtccaagcatcaagataaggaggctgggaattataactgccgtatggcc
gagtactccaactccaatcccccggttggaaacggcaagaagaagaggatcaacaagagc
gacatcatgctggtgcagagcgaggtggaggagagggactctgtgagcaggatgaacgtg
gtgagcagcccgtctctcatcacctcgcctatctgtttcgactaccaggcgaccagcccc
ctgcctctcacgctgcccaggtcagaggtcatgtatctgaaaaccactttcaacagcctg
acggtacctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatg
gatagaatgtcagtgattcagacggataattttccttcggagccgaataacgtggccaac
aggcaaccatttgctcaaagcagctcaacttttaaggatgcagagcgagcgagcctccga
gacagtggccatggtgatagtgaccaggctgatagtgacctggatactaataaaggctgc
gcctgcaacacgtctgccaggggggccctcaagatgaaagccacagcagttaatggccag
cctcttgaccagggacaaggcagatctgttcactgcacagatgaatgtcgtgcgctgggc
cattctgacagatgctggatgccaaaactacgtgtaggaggccaagcagacagcggcgat
aatcgcaccgaccttttcatcccagtgggaatggaggccacggctgagacagagatttat
ggcagcctcaaccgcagcgcagccagaaaaaccctcagcacattcggcaaggagcagcgg
gacagcaccatcctagtggccaacatcaaaccctacttcaagtctcagcgtgcccgcagt
cccctgctgcaggagtgctcttctgggtccagcagccccaccaaagggaacacacccctg
gactcccacaccaaagggcctagggaggaggtggggagggacggggaggggggctcagac
agcagtgcctatggacccccagacggccaatgttcaccgccccatacggaattggaggag
ccgtcatatatggcttgcggcctcacgcccaagtccctgtcaaacagccttatccacagc
tctgagatcagatctgggatcatcagccaggagtgtgtggggatggagtgtgtcagtcca
aaccagcgggactctggggactga
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integrated database retrieval system