Oncorhynchus kisutch (coho salmon): 109871004
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Entry
109871004 CDS
T09179
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00250
Alanine, aspartate and glutamate metabolism
oki00410
beta-Alanine metabolism
oki00430
Taurine and hypotaurine metabolism
oki00650
Butanoate metabolism
oki01100
Metabolic pathways
Module
oki_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
109871004
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
109871004
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
109871004
00430 Taurine and hypotaurine metabolism
109871004
Enzymes [BR:
oki01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
109871004
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
109871004
NCBI-ProteinID:
XP_020317333
Ensembl:
ENSOKIG00005046478
LinkDB
All DBs
Position
LG26:13909100..13925700
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AA seq
586 aa
AA seq
DB search
MAASAPSSSGGEPDPNSTNLRPPGTSYDAWCGVAHGCTRKLGMKICGFLQKNNNLEEKIS
SFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPDGEGDGIF
SPGGAISNMYSVMTARYKFFPDVKTKGMTAAHRLVLFTSEHSHYSIKKASAALGFGTENL
ILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKLSGVERANSVTWNPHKMMGVPLQCSAILVRERGVLSGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEHHIDKCLDLSH
YLYTKIRDREGYQMVFEGEPQHTNVCFWYLPPGIRDMPDGQERRDRLHKVAPKIKALMME
SGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGHDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccttcctcctctggcggggaaccggatcccaactcgacaaattta
cgaccaccaggcacaagctatgacgcttggtgtggagttgctcatggatgtactagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaataacctcgaggagaagattagt
tccttcaaggaaagatcgtctaaggacctgcttgataacagcgacagggattcccgtttc
agacgcacggagacggacttttccaatctgtttgctagagatttattaccagccaaaaat
ggagaggagccaaccatgcagttcttgttggaggtggtggatattctcacaaactacgtc
cggaagaccttcgacagatccaccaaggtcctggacttccaccacccccaccagctgctg
gagggcatggagggcttcaacctggagctgtctgaccagcctgagtctctggagcagatc
ctggtggactgcagggatacccttaaatatggagtgagaacaggtcacccaaggtttttc
aaccagctgtccactggtttagacatcattgggttggcaggagaatggctcacctccact
gcaaacactaacatgttcacctatgagatcgctccagtctttgtgctcatggaacagctg
acgctgaagaagatgagggagatcattggctggcctgacggagagggcgatgggatattc
tcaccaggtggagcgatttccaatatgtacagtgtgatgaccgcccgctacaagttcttc
cctgatgtcaagaccaaaggcatgactgctgcccacagattggtgctcttcacctcggag
cacagtcactactctataaagaaagccagtgctgctctgggctttggaacagaaaacctg
atcctgttgagcacagatgagagagggagagtcattcctgctgatttggaagccaaggtc
atcgatgccaaggcgcggggttgtgtcccaatgtttgtgaatgctacagctggttccaca
gtgtatggagcgttcgaccccatccatgagattgccgacatctgtgagaaatacaacatg
tggctacatgttgatggtgcatggggaggaggcctactgatgtccaggaagcacaggcac
aagctgagtggcgtggagcgggccaactcagtcacctggaatcctcacaagatgatgggt
gtgccactgcagtgctctgccattctggtcagagagaggggagttttatcaggctgcaac
tcgatgtgtgctggctacctcttccaacctgacaaacagtacgatgtatcgtacgacacg
ggggacaaggccatccagtgtggacgacacgtagatatcttcaaattctggctcatgtgg
aaagcaaagggaacaatagggtttgaacaccacatcgacaagtgcttggacctctcgcat
tatctctatactaaaatcagggaccgtgagggctatcagatggtgttcgagggagagccc
cagcacacgaatgtctgcttctggtaccttccgccaggcattcgtgatatgcccgatggt
caagagaggcgggacaggttgcataaggtggcccccaagatcaaggcgttgatgatggag
tctggaactaccatggtgggctaccagcctcagggagacaaggttaacttcttccgcatg
gtcatctccaatcctgccgccaccaggtcagatatcgacttcttgaccgatgagattgag
agactggggcatgacttgtaa
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