KEGG   Oncorhynchus kisutch (coho salmon): 109871028
Entry
109871028         CDS       T09179                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109871028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109871028
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109871028
 Complex B
    109871028
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 109871028
NCBI-ProteinID: XP_020317377
Ensembl: ENSOKIG00005032396
UniProt: A0A8C7MSK9
LinkDB
Position
LG26:complement(23204434..23218215)
AA seq 239 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRGGGHHSRSRSRERRSRSRDRGRGGGGGGGGRDREKRRSRDRERSGRF
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggaatacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgccatggtgaccgatgctccagattacataataaacca
actttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacagagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacctgggagaccatctggtcggaaacgtatatgtgaagttccgtcgtgaa
gaagacgcggagaaggcagtgatggatctgaataaccgctggttcaacggtcagcccatc
cacgccgagctctctcccgttaccgacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcacctgaagcccatctctagggag
ctgaggagggagctatatggacgccgcaggaagaggggaggggggcatcattctcgctcc
cgttccagggaacgtcgttcgcgctcaagggacagaggaaggggaggtggaggtggaggt
ggtggacgcgaccgcgagaaaaggcgctccagagaccgagaacgctctggaagattctaa

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