Oncorhynchus kisutch (coho salmon): 109871041
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Entry
109871041 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 7-like isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109871041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109871041
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109871041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_1
SH3_2
SH3_9
CH
PH
SOS1_NGEF_PH
Syntaxin
Motif
Other DBs
NCBI-GeneID:
109871041
NCBI-ProteinID:
XP_031661766
Ensembl:
ENSOKIG00005020571
LinkDB
All DBs
Position
LG26:21143709..21179193
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AA seq
801 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEAFLQTSLKDGVVLCRLLERLSPGSMDKIYQEP
KNDGECLSNIKEFLKGCTSFRVELFEPSDLLLGLNFSKILSSLVALNKVTADIGVGSDSV
CARHSSAYRIKSFESLASQSSLGRSSKLLQNQFRSLDMSEGSGTQLLVKARFNFEQTNED
ELSFNKGDVINVTRQEEGGWWEGNFNSKTGWFPSNYVREIKGCDKQVSPKSGTLKSPPKG
VDTTAISKTYYNLVLQNILETETEYSKDLQSLLTNYLRSLQSTEKLSSTDVYLILGNLED
INTFQQMLVQSLEECTKLPESQQRVGGFFMNLMPQMKALYVGYCSNHPSAVNVLTQHSEE
LGEFMEGKGASSPGILTLTTGLSKPFMRLDKYPTLTKELERHMEESHPDWPDIQKCMTTF
KSLSAQCQEVRKRKELELQIVTESIRLWEGDDIRTLGSVLYMSQALVNSPGAEEKCERYL
MLFPHVLLMLSASPRMSGFIFQGKLPLTGMTVTMLEDSEAHKNSFELSGSLFERLQVVCN
NQQDQQDWVDHLTRQTKHTTVPSHKPLTVPCHTLPSHPLTPSRHAEGRAMTVAPAYHTLP
HPSSHGAPHSTMMWGPLEPPNTPKPWSLSCLRPSPPLRPSAALSYKEDLSKSPKSVKKLL
PKRKPERKQSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSRAMRRDTGLQVI
IPGEEKIIVEETTSNGQTVVGEKSLEDVVYALRDEVQELKQDNKKMKRSLEEEQRARKDL
EKVVRRVLKTMNDPTWDETNL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgcggagcagacggtcacttggctgatcacactcggcgtgctggagtcgccg
aaaaagactatatcggatccagaggcatttttacagacctccctcaaagatggggtggtc
ttgtgcagactgctggagcggctgagcccgggctccatggacaaaatctaccaagaaccg
aagaacgacggcgagtgcttgagcaacataaaggagtttctcaaaggctgcacttcgttt
cgcgtagagctgtttgagcccagtgatctgctcctaggactgaacttctccaagatactc
agcagtctggtggctctcaacaaagtgactgcagacattggagtgggcagtgacagtgtc
tgtgcccgtcactcgtcagcctatcggatcaagtcgtttgagtctctggcttcccagtca
tcactgggtcgatcctccaagctgcttcagaaccagttccgcagcctggacatgtctgag
ggcagcgggacgcagctattggtcaaggctcgcttcaactttgaacaaaccaatgaggac
gagctgtccttcaacaagggggatgtcatcaatgtgacacgccaggaggagggcggctgg
tgggaggggaacttcaacagcaagaccggctggttccctagcaactatgtccgtgagatc
aaaggctgtgacaaacaagtgtcccccaaatctgggaccctcaagagccccccaaaaggc
gttgacactacggccattagcaagacctactacaacctggtgctgcagaacattctagaa
acagagacagaatattccaaggacctccagagccttctgaccaactacctgcgatcactc
cagagcacagagaaactgagcagtacagatgtgtacctgatcctggggaacctggaggat
atcaacaccttccagcagatgctcgtccaatcactggaggagtgcaccaaacttccagag
agccagcagagggtagggggcttcttcatgaacctgatgccccagatgaaggctctctac
gtgggttactgctccaaccacccctcggcagtcaacgtgctcacccagcacagtgaggag
ctgggggagtttatggaggggaagggagccagtagtccaggtatcctgaccctcaccaca
ggtctcagtaaacccttcatgaggctggacaaataccctacactaacgaaggaactggag
agacacatggaggagagtcaccccgactggccagacatccagaagtgtatgacaacgttc
aagagcctctcggcccagtgccaggaggtgaggaagaggaaggagctggagctgcagata
gtgactgagtccatcaggctgtgggagggagacgacatcaggacactgggctctgttctc
tacatgagtcaggctctggttaacagccctggagcagaggagaagtgtgagcgctacctc
atgcttttccctcatgtcctcctcatgctgtctgccagtccaaggatgagtggcttcata
ttccaggggaagctaccattgactggtatgactgtgaccatgctagaggacagtgaggcc
cacaaaaactcctttgagctttctggcagtctatttgagcgtctccaggttgtgtgtaac
aatcagcaagatcagcaggactgggtagaccacctgacccgtcagaccaaacacaccact
gtccccagccacaaacccctcactgtcccctgccacacgttgccctcccatcctctgact
ccgtcccgtcacgcggagggccgggcgatgacggtggctcctgcctaccacaccctgccg
cacccctcctcccacggggctccacacagcaccatgatgtgggggcccctggagcccccc
aacacccccaagccctggagtctcagctgcctgcgtccctcaccccctctcaggccctct
gcagctctctcctacaaggaggacctcagtaaaagccctaagagtgtgaagaagcttctt
cctaaacgtaaaccagagcgaaaacagtcagacgaggagtttgccctgaggaagagtaca
gctgctctagaggaagatgctcagatcctaaaggtgatagaagcttattgtaccagcgcc
aagaccagacagaccctcaactccagggcgatgcggagggacacagggctgcaagtcatc
atccctggagaggagaagatcattgtggaggagaccacgagcaacggacagactgtagtc
ggagagaagagccttgaggatgtagtgtacgccctgagggacgaggtacaggagctcaaa
caggacaataagaagatgaagaggtcactggaggaggagcagagggcacggaaagatctg
gagaaagtggtcaggagggtcttaaagactatgaacgaccccacctgggacgagactaac
ttatga
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