Oncorhynchus kisutch (coho salmon): 109871045
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Entry
109871045 CDS
T09179
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109871045
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109871045
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109871045
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109871045
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109871045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
109871045
NCBI-ProteinID:
XP_031661794
Ensembl:
ENSOKIG00005043328
LinkDB
All DBs
Position
LG26:complement(19775462..19858524)
Genome browser
AA seq
2652 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTASPNSTNENSPVSPPDEQGQGDGP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYAA
IINIITSKGYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCRE
GKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEI
HEDFIQSCFDRLKASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEE
RTILPMSRAFRGKHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTK
IELFIGGDVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHG
NHFSDGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDN
STVEILRAMCLDHAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDAS
DFQYNFLKSGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVA
EACQPNAEGTIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFF
QASKYIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDEEDEQVCCE
ALEIMTLCFSLLPTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGH
RPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWL
KRIRDEVKRTGETGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFI
FPASNVYLQYMKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMY
YLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTG
TDVDDDMSGDEKQENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFG
HLASSRLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSK
VLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCE
KCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGV
AKLEGDDVNPENQVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGA
DGERNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYI
LFYERMDSLDKDSELVKYIQELTISSSSNNKPPHQVKMPNVIECSVRKQNVQFMHNRMQY
SLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRG
PASDWYDALCVLLRHSKNVRYWFAHNFLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAH
FSLQDGPCPSPTASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLF
VMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVA
ARMQSSINGNPPLPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKL
LRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGI
PDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWL
GDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTK
HGEAVSEEDAAMRKSSSPQQLLPGEGTGQQHTEPDDQEAPEDQDTSPPDDISLYPHSSPG
TTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPVPSSAPVPGPVPGTGPQAQDNWESTEEVP
STTSLAPAPPKE
NT seq
7959 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctcctgttgggggaaacgacaaccaggcaggccaggcg
cccgacgctcagagtcagagccagcccccgctgccacagaaccagacggcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggacggcccc
ccccagctggaggaggaggaacctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggtggttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggctgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctttctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gctggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctcacattgcacacggtgaagaagtacttcctgccc
gtgatcgagatggttcctcagtttctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgtgaagagtttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggag
gaggagtggcttactgcagagcgcatggcggagtggatccagcagaaccacatcctgtcc
atcgtgctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctcccctgagcagctcgaccacctttttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgatgtgcctgtagacatcatggaccaggctctcagtgctcacatcaagatactggac
tacagttgttctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagactcagaggagtcctcatgtgttctatcgtcatgacctgatcaac
cagctccaacacaaccatgccctggtcacgctggtggctgagaacctctctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ctgctgaaggatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggccgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtacgctgcc
atcatcaatattatcacctcgaaagggtactccaagctgatgggagatgagccagacctg
gacccagacattaacaaggacttctttgagaacaacgtcctccagctggacccatctctg
ctcacagagaacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgtcgggag
ggaaagctggtggccaaacgcagggcctacatgatggacgacctggagctcataggactg
gactacctctggagggtcgtaattcaagggagcgatgacatcgccagtcgagccatagac
ctgctgaaagagatctacaccaacctcggaccaaaactacaagtcaatcaggtagagatc
cacgaggatttcatccagtcgtgcttcgaccgtctgaaggcatcgtacgatacgctgcgt
gtcctggacggggacaaggacagcatcaactcggcccggcaggaagccatccgcatggtc
cgcgtgctcactgtgctcaaggagtacatcaacgagtgtgacagcgactaccatgaggag
aggaccatactgcccatgtccagggcgttccgggggaagcacatcacgttgaccgtgcgc
tttcctaaccagggccgtcaggtagatgacctggacatctggtctcacaccaacgacacc
atcggctcggtgcgccgtggcatcctcacacgcatcaaggccaacgccacgcacaccaag
atagagctcttcattggcggggatgtcgtcgacccagccgatgacagaaagctgattggc
cagctcaacctcaaagacaaaacgttgatcacagccaagctgacccaggtgagtgccaac
atgccgtccagcccagacagctcctcggactcttccaccggctcacctggtaaccacggc
aaccacttcagcgacgggcccaacccagaggtggagagctgtctccctggagtgatcatg
tctctccacctgcgctacatatctttcctgtggcaggtagcagacctgggctgtggcatt
aacatgcctctgttacgagatggagccagggtactcatgaagctaatgcctccagataac
agtaccgtggagatcctgcgtgccatgtgtctggaccatgccaagctgggagagaacagc
ctcagccccacactggactcgcgcttctttggcccctcgccatcacaagtcctctacctc
atagaggtggtgtatgccctactcatgccagccagcgccacattgggggaggatgccagc
gacttccagtacaacttcctgaagagtggcgggctgcctcttgtactgagcatgctcaca
cggaacaacttcctgccttcggccgacatggagacacggcgaggggcgtacctcaacgct
ctgaagatcgccaagctgctgctcaccgccgtggggttcggacacgttaaagctgtggcc
gaggcctgccagcccaatgctgaggggaccataccagtctcaccgatcaaccaggccact
catgaccaagccctggtcctccagagtgccctgcaaaacatccccaaccctgcctcagag
tgtatgctccgcaacgtagctatacgcctggctcagcagatctctgacgagaacttcttc
caggcgtccaagtacatcccagacatctgtgtgatccgggcggtgcagaagatagtgtgg
gcgtcgggctgtggcaccgtacagctagtctttagctccaacgaagagatcagcaagatc
tacgagaagacgaatgcggctaaggagccggacgaggaggatgagcaggtgtgttgtgag
gccctggagatcatgaccctgtgtttctccctgctgcccaccgctctggacacactcagc
aaggagaaggcctggcagaccttcatcatagacctgctaatgcactgccacagcaagtca
gttcgtcagatggcccaggagcagttcttcctcatggccaccaggtgttgcatgggccat
cgaccccttctcttcttcatcaccctcctcttcactgtgctggggagcaccgctaaggag
cgggccaagcatgctggggactatttcaccctgctcaggcacctcctgaactatgcctac
aacagcaacatcaacctgcccaacgcagaggtgctgctcaacaatgaaatcgactggctc
aagaggatcagggatgaggtaaagaggacaggggagacgggcgtagaggaaaccatcctg
gagggccacatcgggatcaccaaggagctgctggccttccagacatcagagaagaagtac
tacatcggctgtgagaagggaggggccaacctcatcaaggagttgatagatgacttcatt
ttcccagcatcgaacgtgtacctgcagtacatgaagagtggggagttccccacggagcaa
gccatccctgtctgtagcagccccgcctctatcaacgcaggcttcgagctgctggtggcg
ctggcggtgggctgtgtccggaatctaaagcagatggtcgacacgctcactgatatgtac
tacctaggttgtgaggctctgacagagtgggagtatctccccccggtgggaccgaggccc
actaaaggctttgtgggactgaagaacgccggagccacctgctacatgaactcggtcatc
cagcagctctacatgatcccgcccatacgcaacggcattctggccatcgagggcaccggc
actgatgtggacgatgacatgtccggtgatgagaagcaggagaacgagagtaatgtggac
ccgcgagatgaggtgtttaactaccaccaccagtttgacgacaagccatcgctcagtaaa
tcggaggacaggaaggagtacaacatcggggtgctgcgccacctgcaggtcatctttggc
cacctggcctcctccagactgcagtactacataccgagaggcttctggaaacagttcagg
ttatggggcgagcctgtgaatctgcgagagcagcacgatgccctggagttcttcaactct
ctagtggacagtctggacgaggctctgaaagccctgggtcacccagccatgctcagtaag
gtgctgggtggatcctttgctgaccagaagatctgccaggggtgcccacataggtatgag
tgtgaggagtcgttcaccactctgaatgtagacatcaggaaccaccagaacctgttggac
tcaatggagcagtacgtcaaaggagacctgctggagggtgctaacgcataccactgtgag
aagtgcaacaagaaggtggacacagtgaagcggctgctgatcaagaagcttcccccagtg
ctggccatccagctgaagaggtttgactacgactgggagagggagtgtgccatcaagttc
aacgactactttgagttccccagggagctggacatggagccttacacagtagccggggtg
gccaagctggagggggacgacgtcaacccagagaaccaggtgatccagcagaacgagccc
tctgaaccagagcccccaggcagctccaagtaccgcctggttggggtgctggtccactca
ggccaggccagcggcggacactactactcctacatcacacagaggaacgtgggcggggca
gacggcgagcggaaccgctggtacaagtttgacgatggcgacgtgacggagtgcaagatg
gacgacgaggaggagatgaagaaccagtgcttcggaggggagtacatgggcgaggtgttt
gaccacatgatgaagaggatgtcgtaccggcgtcagaagcgctggtggaacgcatacatc
ctcttctacgagcggatggactcactggacaaggacagcgagctggtcaagtacattcag
gagctgaccatctcatcctcgtccaacaacaagccgccgcaccaggtcaagatgcccaac
gtgatcgagtgcagcgtgcgcaagcagaatgtgcagttcatgcacaaccgtatgcagtac
agcctggagtatttccagtttgttaagaaacttctgacctgtaacagtgtctatttaaac
ccaccgccaggacaagaccatctactgcctgaggcggaggagatggctatgattagtgtt
cagctggctgctaagttcctattcagcactgggttccacaccaagaaagtagtgaggggg
cccgccagtgactggtatgatgcactttgcgtcctgctgagacacagtaagaatgtacgc
tactggtttgcacacaacttcctgtttgcctacaccaaccgcttctccgagtacctgctg
gagtgccccagtgccgaggtccggggagcgtttgccaaactcatcgtcttcattgcacac
ttctccctgcaagacggaccctgcccctcccccactgcctctcctgtcggagcctccacc
caaccacaggcatgtgataacctgagtctcagtgaccacctgttgaggactgtattgaac
ctgctcaggagagaggtgtcagagcacggccgacacctgcagcagtacttcaacctcttc
gttatgtatgccaacctggggctggcagagaagacccagttgttgaagctgagtgtccca
gctacgttcatgctggtggctttagacgaggggcctggccctcccataaagtaccagtat
gctgaactaggcaaactgtacaccgtagtctcccaactggtgcgctgctgtgacgtggcc
gcgcgcatgcagtcctccatcaatggtaacccccctctccctaacccgtacggtgatgcc
aaccagaccaccccggtgatgcccgtgcagcagctggtgggagagatcctgttcgtaagg
accagctacgtaaaaaagatcattgaggactgcagcaactcagaggagacagtcaagctg
ctgcgcttcagctgctgggaaaacccccagttctcctccactgtactatcagagctgctc
tggcaggtggcgtactcgtacacctacgagctgaggccttacctggacctgctgctgcag
atcctgctcattgaggactcctggcagactcacaggatccacaacgtgctgaagggtata
ccagatgacagggatggcctatttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgtatcaagtgcatggtagccctctttagcaactgctctgtggcctac
cagatacttcagagtaacggggacctgaagcgtaagtggacgtgggcagtggagtggctc
ggtgacgagctggagaggaggccctacacagggaaccctcagtacacctacaacaactgg
tctcccccagtccagagcaacgagacctccaacggatacttcctggagcgctcgcactcc
gcacgcatgaccctggccaaggcctgtgaactctgccctgaggagtgtcacttaacgaag
cacggtgaggcggtgtctgaagaagatgctgccatgcggaaatcgtcctcgccacagcag
cttttgccaggggaagggacaggacagcagcacactgagcccgatgaccaggaagccccg
gaagatcaggacacctcccctccagatgacatctccctctaccctcattcgtctccgggg
actacgacacagtttcagcagcagaacaaccacccccacgggcagccgtacacaggccca
gctgcccagcacatgaacaacccccagcgccctgtcccttcctctgccccagtcccaggc
cctgtgcccggcacaggcccacaagcacaagacaactgggagagcactgaggaggtcccc
tccaccacctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
