KEGG   Oncorhynchus kisutch (coho salmon): 109871071
Entry
109871071         CDS       T09179                                 
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109871071 (stxbp5l)
Membrane trafficking [BR:oki04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109871071 (stxbp5l)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    109871071 (stxbp5l)
SSDB
Motif
Pfam: LLGL WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR19_1st Lgl_C Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Synaptobrevin PEP5_VPS11_N RNase_PH_C
Other DBs
NCBI-GeneID: 109871071
NCBI-ProteinID: XP_031661574
Ensembl: ENSOKIG00005014691
UniProt: A0A8C7G162
LinkDB
Position
LG26:14706284..14924421
AA seq 1261 aa
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDT
PYSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKAGDGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISSHVILYRFSKHD
ANTQIVSLEVRLQFDSEDVISPSEAENNPCFSDPSSPQPPGSPGSGTQDSLPCLKVKSRP
VRMPPGYQAEMVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILMCM
GTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDNQV
SMDMERSKSPTSVPYPSSLHYDPRSMPEPVASLRASHCSPVFYLLDNVKGPGRKLSLPTD
LKTDLDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQSAACMEISLP
VSSHTEGGHASRRAMLQQLHGVSMYSHDEHHTTSYNWSERESRENSFSRSRSSSVSSIDR
DTKESVTTLQFGESYGRKGDALPTACLWVGTSLGVVLLLPISIPTEEEERMEEPITMGPS
GTVLMLKGSVLRFAFLDCGGALIQSPYEVWRDPNGPEDPDRTRRRKLINFSPSSSQEACG
DGHLAVVCSEKQAKVILMPTQAVLFTHNITESSFLLRADVVSVCNSVCLACFCANGHIMT
LSLPSLRPLMDINYLPLTDLRIARTFVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQDML
GELFTPIETPEAQNKGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGPMGLENM
KAAAGGVVGDLARARIALDQRGERLGELEERTALMMNSAETFSTHAHQVMLKHKDKKWYQ
L
NT seq 3786 nt   +upstreamnt  +downstreamnt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccctcgtgcggcagtgcagctggtaccccgaccgctcatgcgcccactccccaggat
atccatgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtacgccat
ggcttcccgtaccagcccacctgcctggcctttgatcccgtccagaagatcctggccatc
ggctccagaacaggaggcattcggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagatgacacgctacacctgtggaaccttcgccagagacgcccagccatc
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccaatgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgtgagctggcatcacgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcacgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctggg
ggtctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaag
gccatcacagtgctggagatggaccaccctatcgtagagttcctagtactctgtgacacc
ccatactccaacgaggtccaggatccttatgcagtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgagtgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagcggtggcacatggacactaggctcacagacctacccagagatcatcgtcaca
ggacacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaggtctttgagaagcccaaggcgggagatgggcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttcttcccacgtcatcctctaccggttcagcaaacacgac
gccaacacgcagatagtgtcactagaggtgcgcctgcagtttgattcagaggacgtcatc
tccccgtcagaggcagagaacaacccgtgtttctcggaccccagttccccccagccgccc
ggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagagtcgtcca
gtgcggatgcccccggggtaccaggctgagatggtggtgcagctgcagtgggtggatgga
gagcccccccagcagatcaccagcctggacatcaactctgcctacggcctcctagcgttt
gggaactgtaatggtctaacggtggtggacttccttcagaagacgatcctgatgtgtatg
ggcacactggacctctacggagccgcagacccctaccaacgactcacacgctccccacgc
aagaacagacagtccacctcagacttttgcatgcgtggtctgtctcacttttattcagat
tcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataaccaggta
tccatggacatggagagaagcaagtcacccacctcagttccctacccaagctcccttcac
tatgaccctcgctccatgcctgagcctgtggccagtctgagagccagccactgcagtcca
gtcttttacttactggacaatgtaaagggacccggcagaaagttaagtctgccaacagat
cttaagactgatcttgatcatgtcaatggacattgcactagtcccacctcccagccctgc
tccgtggggaaacctcgcatcacaggggttcccgagggcccgcggctcacccggagaggg
cctggccgaccgcccttccgcaaggcccagtccgccgcttgcatggagatctctttgcct
gtttcctcccacacagaaggtggccatgcgtccaggagggcaatgcttcagcagttgcat
ggagtcagtatgtattcccacgacgagcaccacaccacctcctacaactggagcgagaga
gaaagtagagagaactcattcagtcgctcgcggagctccagtgtgtccagcattgatcgc
gacaccaaggagtcagtgaccacgctgcagttcggagagtcctacggccgtaagggcgat
gctctgcctaccgcctgcctgtgggtgggcaccagcctgggcgtggtcctgctcctgccc
atatccatccccacagaagaggaggagaggatggaggagcccatcaccatggggcccagt
ggtaccgtcctgatgctaaaaggctctgtgttgagatttgccttcctggactgtgggggc
gctctcattcagagtccctacgaggtgtggcgggaccccaacggacccgaggaccccgac
cggacccgcaggcgcaagctgatcaacttctccccgtcatcatcccaggaggcgtgcggt
gacggtcacctggccgttgtgtgctctgagaagcaggccaaggtcatcctcatgcccacc
caggctgtcctgttcacccacaacatcaccgagtcctccttcctcctgcgggctgacgtt
gtctccgtctgcaacagcgtctgcctggcctgcttctgtgccaacggacacatcatgacc
cttagtttgcccagtctaagacccctgatggatatcaactaccttcccctgaccgacttg
cgtatcgcccggacctttgtcttcactaacggaggccaggccctgtatctgagctctcct
acagagatacagcgtctcacatacagccaggagatgacggacaacctacaggacatgctg
ggggagctgttcactcctatagaaacaccagaggcccagaacaaaggattcctcaagggc
ttctttgggggcaatgcccagaccttcgacagagaggagctgtttggggaggcagcagcg
ggaaaggcctctcggagtttggcccagcacatccctggtccaatgggattggagaacatg
aaggctgcagccggcggcgtcgtgggggacctggcacgagcccgcatcgccctggaccag
agaggagagagactgggcgagctggaggaacgcaccgccctcatgatgaacagcgccgag
accttctccacacacgcccaccaggtgatgctgaaacataaggacaagaaatggtatcag
ctttaa

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