Oncorhynchus kisutch (coho salmon): 109871131
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Entry
109871131 CDS
T09179
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109871131 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109871131 (cnot9)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109871131 (cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
109871131
NCBI-ProteinID:
XP_020317560
Ensembl:
ENSOKIG00005017002
LinkDB
All DBs
Position
LG26:complement(9556932..9582769)
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AA seq
297 aa
AA seq
DB search
MLATGAAATTALVQVDREKIYQWINELSTPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
PRAREALRQCLPDQLKDATFAQVLKDDTTTKRWLAQLVKNLQEGPVTDGRGIPLTAQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggcgcagctgcaaccacagccttggttcaggtggatcgggaaaagatc
taccagtggatcaacgagctgtctacccccgagaccagggagaatgccctcctggagctc
agcaagaagagggagtctgtccctgaccttgcacccatgctatggcactcttgtggaacc
attgctgccctcctgcaggaaattgtgaacatctacccctccataaacccaccaactctg
acagcccaccaatccaacagagtatgcaatgccctcgcgctcttacagtgtgtcgcctcc
catccagagactcggtctgcatttttggcagcacacattcctctcttcctctaccccttc
ctgcatactgtgagcaagacacgcccatttgagtacctgcgcctcaccagcttaggagtc
ataggtgctctggtcaaaacagacgaacaggaggtgatcaatttcctgctcaccacagag
atcatccctctatgcctgcgcatcatggagtcaggcagcgaactctccaaaacggttgct
actttcatactccaaaaaattctgctggacgacaccgggctggcatacatatgccagacc
tatgaacgcttctctcacgtggcaatgattcttgggaaaatggtgctgcagctttcgaag
gaaccatctgcacgtctgctgaaacatgttgtacgctgctaccttcgcctctctgataat
ccaagagcgcgagaagcactgcgccagtgcctgcctgaccagttgaaggatgccacattc
gcccaggtgctaaaggacgacaccaccaccaagcgctggctggcccagctggtcaagaac
ctgcaggagggcccggtgacggacggccgaggcatccccctgaccgcacagtaa
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