Oncorhynchus kisutch (coho salmon): 109871143
Help
Entry
109871143 CDS
T09179
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109871143
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109871143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
109871143
NCBI-ProteinID:
XP_020317572
Ensembl:
ENSOKIG00005016777
LinkDB
All DBs
Position
LG26:complement(16636095..16640689)
Genome browser
AA seq
970 aa
AA seq
DB search
MGFCWIRGVGECVVIAVLFYSVQSTTTRYYTYEEDAPGTEIGNLSQDLKIDPAEDPGTSF
RFMQETNSSVIQMREIDGLLAVGETIDREHLCPRSPRCFVTFDIVAFSKEKFQLIHVEIE
VKDINDNSPHFLHKETTLEISENVQVDSRFPLDIAVDHDVGNNYIQRYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREVEDSYTIEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPIGYQVLKVHAFDPDAGINGEVVYGFVEDTSSEAVRIFNVDRISGAV
TLKTLVDYEKQRSYELNIKASDLGRNSIPSTCKVVVDVVDVNDNAPEITIKPMTSTSDGV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHDHFKLQQAYGDTFMIVTTTTLDRE
KIPEYNLTVVAEDLGTPPFKTVKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDMGKNAKVSYKLIDSDVVGEASILTYVSIDPMSGSLYSLRSFDFETIQQIELTI
QADDNGSPQLSSTSMIRIKVVDQNDNYPYFTFPVMLNDSAEVPLPVNAPLGYLALWVKGQ
DKDEGMNGELSFRIVQGDSNLFSINKDTGEIALKQGLASAIGNVLEIKIAVSDNGRSPLS
SSATIHFVVTYSQLSDDQVVIVLRSTDEEDAGLDVSVVVIIMLGGGCALLLIAIVIVVIT
CKLNQGGKDQDSKRDVSHVLFDSKHHPRLNSAEPNMYGGPRGFLNERTSSSLDESSLYEE
KNGDLESQMFLPPKPFLPTSMWQGEKYCLQMSGIDQQSVKDSGKGDSDFNDSDSDISGDG
GKRNLSTFQPWAKSSIHAANTLAVDCQGTYCVIPTQSFQAPLDNAYTIGFSQAPVYNNPR
AYPHSWKDFGYSTSIPKARNTMQTFSHHTGTLPSYFAHQTRQSAAGLAEIQEYNQDITTV
ATISEVATIF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggattctgctggattcgaggagttggagagtgcgtggtgattgctgttctgttctac
tcggttcagtctacaactacgaggtactacacttatgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagcagaggaccctggaacatctttc
cgcttcatgcaggagaccaattcgtctgtgattcaaatgagggagattgatggactttta
gcagttggggaaacgattgaccgagagcatctctgcccaaggtccccgcgatgctttgtc
accttcgacatagttgccttctccaaagaaaagtttcagctcatccacgtggagatcgag
gtaaaggacatcaatgataactcaccccacttccttcacaaagagacgacccttgagata
tccgagaatgttcaggtggactcacgattcccgttggacatcgctgttgaccatgatgtc
ggcaataactacatccaacgttaccatatctctccctccagccatttcatagttgatgtg
cgcagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaagcaatggacaga
gaggttgaagattcctacacaattgaagtgacggcaacagatgggggagagccacccaga
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcactaaaagttgaactttatgaggattcacccataggttaccaagtgctg
aaagtgcatgcgtttgacccagatgctggcatcaatggcgaggtagtgtatggatttgta
gaagacacgtcatctgaagcagtgcgcatttttaatgtagaccgaatttccggtgctgtg
actttaaaaacattggttgattatgagaagcagaggtcttatgaattgaacattaaagca
tccgatttaggcagaaattctattccatcgacctgcaaagttgttgttgatgttgtagat
gtaaatgataacgcaccagaaatcactatcaagccaatgacctcgactagtgatggtgta
gcttacatcacggaggccgcagccgaggaaagttttgttgcgctgatcagcacctcggac
agtgattctggctcgaacggttacgtgcgcagcagcctacacggccacgatcatttcaag
ctgcaacaggcctacggggacacttttatgattgtaacaaccaccactttagatagagag
aagatcccagagtataacctcactgtagtggctgaagacctcggaacaccacctttcaaa
acagtgaagcagtataccatcagagtgaccgacgagaacgacaacgcccccctcttcagt
aaatccatttatgaagtttctgtcctggaaaataatatccctgggtcatatataactact
gttgtagcacgtgaccttgacatgggtaaaaatgccaaagtatcatacaaactaattgat
tcagatgttgtgggtgaggcctccattttgacttatgtgtctatagacccaatgtcaggg
tcattgtatagtctgagatcttttgattttgaaaccatccaacagattgaattaaccatc
caggctgatgacaacggatcacctcagctgtcaagcacatccatgatcagaatcaaagtt
gttgatcagaacgacaactatccctatttcacctttcctgttatgctgaatgactctgct
gaagttcctcttcctgtcaatgcaccactggggtacctggccctatgggtcaagggccag
gataaggatgagggcatgaatggtgagctcagcttcagaatcgtacaaggtgactctaac
ctattttcaatcaataaagacactggagaaatagctctaaaacaggggctggcctctgcg
attggaaatgttttggaaatcaaaattgcagtgagtgacaatgggagatcccccctctcc
agcagtgccaccattcactttgttgtcacatattcgcagctctcagacgaccaagttgtc
attgtactacgttcaactgatgaggaagacgcaggcttggatgtttcagtagtagttatc
ataatgctcggcgggggttgtgctctgctgctgattgccatagtgattgttgttatcaca
tgcaagttgaatcaaggagggaaggatcaagactccaagagagacgtgtctcacgtcctg
tttgactccaagcatcatcccaggctcaactctgcagaacccaacatgtacggtggacca
aggggtttcctcaatgaaaggacctcttcatctctcgatgagtccagcctgtatgaggag
aaaaatggagacttggagtcacagatgttcctgcctcctaagcctttcctaccaacatct
atgtggcaaggggaaaaatactgcctgcaaatgagtggcattgaccagcagagcgtaaag
gacagtggcaagggagacagtgacttcaatgacagtgactctgacatcagtggggatgga
ggcaagaggaacctcagcaccttccagccctgggccaaaagttccatccacgccgctaac
accctcgctgtggattgtcaaggcacttactgtgtaataccaacccaaagcttccaggcc
ccactagacaatgcatacacaattggcttttcccaagcaccggtctacaacaatccccgt
gcctatccccactcctggaaagactttggctacagcaccagcattcccaaagcaagaaac
accatgcagacgttctctcatcacacaggtacactcccctcttacttcgcccatcaaacg
agacaatctgctgccggacttgctgaaattcaggagtacaaccaagatattactacagtg
gcaaccatatctgaagttgccaccattttttaa
DBGET
integrated database retrieval system