KEGG   Oncorhynchus kisutch (coho salmon): 109871145
Entry
109871145         CDS       T09179                                 
Name
(RefSeq) protocadherin-17
  KO
K16499  protocadherin delta 2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109871145
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   109871145
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 109871145
NCBI-ProteinID: XP_020317573
Ensembl: ENSOKIG00005016769
LinkDB
Position
LG26:complement(16581122..16602745)
AA seq 1109 aa
MDMRLPVIFFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVERGEKSNFRVL
ENSAPHLIDVDPESGLLFTKQRIDRETLCRRSPKCQLSMEVFANDKEICMIKIDVVDIND
NSPGFPSDHINIDISENAAAGTRFPLTIAHDSDSGGNGIKTYQVTRDDYNTFSLDLKLRG
EGTIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPA
YVLELPENSPPGKMLIDLNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPNTGVIKIQG
EIDYEENPTIEFDVQAKDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPP
ESVIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTI
VARDNGIPSLNYTKSFTVKILDENDNAPRFTKTIYVLQVPENNIPGEYLGSVLAHDPDIG
RNGTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFNVQAKDAGSPHM
ESSATVRVSVLDVNDNLPVIVLPLLLNDTAEIMIPRNVGLGYIVTTVRAVDHDFGESGRL
TYEISEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKA
STGAMAGGESGASGEQQHWDLSLPLIITLCIISVLLLAVMTAIAVKSKHQDKEAGNYKCR
MAEYSNSNPPVGKGKKKRINKNEIMLVQSEMEERDSVSRMNVVSSPSLITSPICFDYQTT
SPLPLTLPRSEVMYLKTTSNSLTVPRAGCHSSFAGLTTETPMNRMSVIQTDNFPSEPNYT
SNRQPFAQSSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREAIKMKATAVN
GQPLEQGQGRSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMEAMVETE
IYGSLNRSAARKTLSTFGKEQRDSIILVANVKPYLKSQRGLSPLLQECSSVSSSPTKGDT
PLDSPTKGPREEVGRVGEGGSDSSAYGPPDGQCSPPHTELEDPSYLSCDLSPKSLSNSLI
HSSGIRSGIISQECGGMECVNLDQRDSGN
NT seq 3330 nt   +upstreamnt  +downstreamnt
atggatatgcgtcttcctgtcatctttttccttctcttttgggctaaagcccggactctg
aaaaatctcaattattccgttccagaggagcagggacctggaactgttatcggaaacatt
gctaaggatgccggatttggaccggtggagagaggggaaaaatctaactttagagttctg
gagaattctgctccacatctcattgatgtggacccggagagtgggctgctttttaccaaa
cagcgaattgacagggagacattgtgcagacgcagccccaagtgtcagctctccatggaa
gtgtttgccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgac
aactcgccaggttttccctcagatcacatcaatattgatatttcagagaatgcagctgct
gggacacgtttccctctaacaattgcgcatgactcagattctgggggaaacggaataaag
acttatcaggtcaccagagatgattacaatacattttctttggacttgaaattgaggggc
gagggaaccatctatccggaattggtagttcagcgacctctagatagggaggatcagtcc
catcataccctccttttgacagccattgatggaggggagtatccaagatcagggtccatg
caaatcaatgtgagagttactgattcaaatgataatagcccagtatttgacaaacccgcc
tatgtgctggagctccctgaaaactcaccacctgggaaaatgctgatagacctaaatgca
acagaccaagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatct
gatagagtccaggagttgttttctattgaccccaacacaggtgtaataaagattcaggga
gaaattgactatgaagagaatccaaccattgaatttgacgtgcaggccaaggacctgggg
cctaaccccatccctggccattgtaagatttcagtcaaagtgcttgacaagaatgataat
tggcctgtcataagttttgtctcagtccgccagggagctatcagtgaggcagcacctcca
gaatctgtcatcgccctggtgagagtcactgataaagattctggaagaaatggccagcta
caatgcagagtgcttggcaatgtaccattcaggctgcaggaaaacaatgataatttttac
actctgctcacagacagacctctagacagggaactgaaagacgaatataacgtgactata
gtggccagagacaacggaataccttcgttgaattacaccaaatcgttcacagtgaaaatc
ttagatgagaatgataatgcaccacgtttcaccaagaccatctatgtgctccaggtgcct
gagaacaacatcccaggggagtacttaggctcagttctggctcatgatccagatataggt
cggaatggaactgtgtcttactccattttgccgtcgcacatcggagacgtgtcagtttac
acctacgtgtctgtcaatcctaccaacggagccatatacgcctcaaggtctttcaactat
gaacaaactaagttctttgagttcaatgttcaagctaaagacgcagggtctcctcatatg
gagagcagtgccacagtcagggtcagtgtgcttgacgtcaatgacaatctaccagttatt
gtattacccctcctgctaaatgacactgcagaaatcatgatacctagaaatgtaggcctg
gggtacatagtgaccacggtgagagcagtcgaccatgacttcggcgagagcggtcgtctg
acctacgagatctctgagggtaacgaggagcacctgtttgagatggaccctgtggccggc
gaggtcaggactgcccatgctgtgtgggaggacgtggccccagctgtagagctggtagtg
aaggtaaccgatcacggcaagcccccactttctgctgtggccaagctgatcattaaggcc
agcacaggagccatggcaggaggggagtccggggccagcggggagcagcagcactgggac
ttgtccctgcccctcatcatcaccctttgcatcatctctgtcttgctgctggctgtcatg
actgccatcgccgttaagtccaagcatcaagataaggaggctgggaattataagtgccgc
atggctgagtactccaactccaatcccccagtggggaagggcaagaagaaaaggatcaac
aagaatgaaatcatgctggtgcagagcgagatggaggagagggactctgtgagcaggatg
aacgtggtgagcagcccatctctcatcacctcacctatctgtttcgactaccagacgacc
agccccctgcctctcacgctgcccaggtcagaggtcatgtacctgaaaaccacctccaac
agcctgacggtgcctcgggctggctgtcactcgagcttcgcagggcttaccacagagact
cctatgaatagaatgtcagtgatacagacggataattttccctcggagcccaattatacg
tccaacaggcagccatttgctcaaagcagctcaacatttaaggatgcagagcgagcaagc
ctccgagacagtggccatggtgatagtgaccaggctgatagtgaccaggatactaataaa
ggctcccactgcgacacgtctgccagggaggccatcaagatgaaagccacagcggttaat
ggccagcctctcgagcagggacaaggcagatctgttcactgcacagatgaatgtcgtgca
ctgggccattctgacagatgctggatgccaaagctacgtgtaggaagccaagcagacagc
gccgataatcgcaccaaccttttcatcccagtgggaatggaggccatggtggagacagag
atttatggcagcctcaaccgcagtgcagccagaaaaaccctcagcacgttcgggaaggag
caacgggacagcatcatcctagtagccaacgtcaaaccctacttaaagtctcagcgcggc
ctcagtcccctgctgcaggagtgctcctccgtgtccagcagccccaccaagggggacaca
cccctggactccccaaccaaagggcctagggaggaggtggggagggtcggggaggggggc
tctgacagcagtgcctatggtcccccagatggccagtgttcaccgccccatacagaactg
gaggatccgtcgtacctgtcctgcgacctcagtcccaagtccctgtccaacagccttatc
cacagctctgggatcagatctgggatcatcagccaggaatgtggggggatggagtgcgtc
aatctggaccagcgggactctgggaactaa

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