Oncorhynchus kisutch (coho salmon): 109871145
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Entry
109871145 CDS
T09179
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109871145
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109871145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109871145
NCBI-ProteinID:
XP_020317573
Ensembl:
ENSOKIG00005016769
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All DBs
Position
LG26:complement(16581122..16602745)
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AA seq
1109 aa
AA seq
DB search
MDMRLPVIFFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVERGEKSNFRVL
ENSAPHLIDVDPESGLLFTKQRIDRETLCRRSPKCQLSMEVFANDKEICMIKIDVVDIND
NSPGFPSDHINIDISENAAAGTRFPLTIAHDSDSGGNGIKTYQVTRDDYNTFSLDLKLRG
EGTIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPA
YVLELPENSPPGKMLIDLNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPNTGVIKIQG
EIDYEENPTIEFDVQAKDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPP
ESVIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTI
VARDNGIPSLNYTKSFTVKILDENDNAPRFTKTIYVLQVPENNIPGEYLGSVLAHDPDIG
RNGTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFNVQAKDAGSPHM
ESSATVRVSVLDVNDNLPVIVLPLLLNDTAEIMIPRNVGLGYIVTTVRAVDHDFGESGRL
TYEISEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKA
STGAMAGGESGASGEQQHWDLSLPLIITLCIISVLLLAVMTAIAVKSKHQDKEAGNYKCR
MAEYSNSNPPVGKGKKKRINKNEIMLVQSEMEERDSVSRMNVVSSPSLITSPICFDYQTT
SPLPLTLPRSEVMYLKTTSNSLTVPRAGCHSSFAGLTTETPMNRMSVIQTDNFPSEPNYT
SNRQPFAQSSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREAIKMKATAVN
GQPLEQGQGRSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMEAMVETE
IYGSLNRSAARKTLSTFGKEQRDSIILVANVKPYLKSQRGLSPLLQECSSVSSSPTKGDT
PLDSPTKGPREEVGRVGEGGSDSSAYGPPDGQCSPPHTELEDPSYLSCDLSPKSLSNSLI
HSSGIRSGIISQECGGMECVNLDQRDSGN
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcgtcttcctgtcatctttttccttctcttttgggctaaagcccggactctg
aaaaatctcaattattccgttccagaggagcagggacctggaactgttatcggaaacatt
gctaaggatgccggatttggaccggtggagagaggggaaaaatctaactttagagttctg
gagaattctgctccacatctcattgatgtggacccggagagtgggctgctttttaccaaa
cagcgaattgacagggagacattgtgcagacgcagccccaagtgtcagctctccatggaa
gtgtttgccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgac
aactcgccaggttttccctcagatcacatcaatattgatatttcagagaatgcagctgct
gggacacgtttccctctaacaattgcgcatgactcagattctgggggaaacggaataaag
acttatcaggtcaccagagatgattacaatacattttctttggacttgaaattgaggggc
gagggaaccatctatccggaattggtagttcagcgacctctagatagggaggatcagtcc
catcataccctccttttgacagccattgatggaggggagtatccaagatcagggtccatg
caaatcaatgtgagagttactgattcaaatgataatagcccagtatttgacaaacccgcc
tatgtgctggagctccctgaaaactcaccacctgggaaaatgctgatagacctaaatgca
acagaccaagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatct
gatagagtccaggagttgttttctattgaccccaacacaggtgtaataaagattcaggga
gaaattgactatgaagagaatccaaccattgaatttgacgtgcaggccaaggacctgggg
cctaaccccatccctggccattgtaagatttcagtcaaagtgcttgacaagaatgataat
tggcctgtcataagttttgtctcagtccgccagggagctatcagtgaggcagcacctcca
gaatctgtcatcgccctggtgagagtcactgataaagattctggaagaaatggccagcta
caatgcagagtgcttggcaatgtaccattcaggctgcaggaaaacaatgataatttttac
actctgctcacagacagacctctagacagggaactgaaagacgaatataacgtgactata
gtggccagagacaacggaataccttcgttgaattacaccaaatcgttcacagtgaaaatc
ttagatgagaatgataatgcaccacgtttcaccaagaccatctatgtgctccaggtgcct
gagaacaacatcccaggggagtacttaggctcagttctggctcatgatccagatataggt
cggaatggaactgtgtcttactccattttgccgtcgcacatcggagacgtgtcagtttac
acctacgtgtctgtcaatcctaccaacggagccatatacgcctcaaggtctttcaactat
gaacaaactaagttctttgagttcaatgttcaagctaaagacgcagggtctcctcatatg
gagagcagtgccacagtcagggtcagtgtgcttgacgtcaatgacaatctaccagttatt
gtattacccctcctgctaaatgacactgcagaaatcatgatacctagaaatgtaggcctg
gggtacatagtgaccacggtgagagcagtcgaccatgacttcggcgagagcggtcgtctg
acctacgagatctctgagggtaacgaggagcacctgtttgagatggaccctgtggccggc
gaggtcaggactgcccatgctgtgtgggaggacgtggccccagctgtagagctggtagtg
aaggtaaccgatcacggcaagcccccactttctgctgtggccaagctgatcattaaggcc
agcacaggagccatggcaggaggggagtccggggccagcggggagcagcagcactgggac
ttgtccctgcccctcatcatcaccctttgcatcatctctgtcttgctgctggctgtcatg
actgccatcgccgttaagtccaagcatcaagataaggaggctgggaattataagtgccgc
atggctgagtactccaactccaatcccccagtggggaagggcaagaagaaaaggatcaac
aagaatgaaatcatgctggtgcagagcgagatggaggagagggactctgtgagcaggatg
aacgtggtgagcagcccatctctcatcacctcacctatctgtttcgactaccagacgacc
agccccctgcctctcacgctgcccaggtcagaggtcatgtacctgaaaaccacctccaac
agcctgacggtgcctcgggctggctgtcactcgagcttcgcagggcttaccacagagact
cctatgaatagaatgtcagtgatacagacggataattttccctcggagcccaattatacg
tccaacaggcagccatttgctcaaagcagctcaacatttaaggatgcagagcgagcaagc
ctccgagacagtggccatggtgatagtgaccaggctgatagtgaccaggatactaataaa
ggctcccactgcgacacgtctgccagggaggccatcaagatgaaagccacagcggttaat
ggccagcctctcgagcagggacaaggcagatctgttcactgcacagatgaatgtcgtgca
ctgggccattctgacagatgctggatgccaaagctacgtgtaggaagccaagcagacagc
gccgataatcgcaccaaccttttcatcccagtgggaatggaggccatggtggagacagag
atttatggcagcctcaaccgcagtgcagccagaaaaaccctcagcacgttcgggaaggag
caacgggacagcatcatcctagtagccaacgtcaaaccctacttaaagtctcagcgcggc
ctcagtcccctgctgcaggagtgctcctccgtgtccagcagccccaccaagggggacaca
cccctggactccccaaccaaagggcctagggaggaggtggggagggtcggggaggggggc
tctgacagcagtgcctatggtcccccagatggccagtgttcaccgccccatacagaactg
gaggatccgtcgtacctgtcctgcgacctcagtcccaagtccctgtccaacagccttatc
cacagctctgggatcagatctgggatcatcagccaggaatgtggggggatggagtgcgtc
aatctggaccagcgggactctgggaactaa
DBGET
integrated database retrieval system