Oncorhynchus kisutch (coho salmon): 109871154
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Entry
109871154 CDS
T09179
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109871154
Peptidases and inhibitors [BR:
oki01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
109871154
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Pentapeptide_2
Motif
Other DBs
NCBI-GeneID:
109871154
NCBI-ProteinID:
XP_031662200
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Position
LG26:13627196..13657975
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AA seq
1306 aa
AA seq
DB search
MLFPAVTWFLLVAGLLGVWAQDYYEERTVNKRPRGRGAQLQAPAIATNVQKHNGQAILDE
DCGLELAFLLDSSESAKENHEQEKRFSMDVVDRLQATRLQTGRSLSWKAALLQYSSHVII
EQTFKQWRGTDNFKSHITPIVYIGQGTYTTYAITNMTKMYLEESSPGNIKVAMLLTDGIS
HPRNPDIFSAAADAKNQGVKFFTVGITRAANESANVAQLSLLASSPASRYLHNLQDIDIV
EKVLKEITDLADEGCPPAQQCACEKGERGLSGLAGKKGRPGDDGAPGLKGLKGEGGLSGL
PGQDGGEGKSGYKGERGERGECGTPGIKGDRGPEGPMGTRGVRGLQGLPGPQGDVGPEGP
QGKKGDRGQAGPAGIQGENGIGLPGPKGDLGFQGKPGPPGPTGLSEYGQPGPQGPQGFQG
EKGPHGEGLPGPKGERGLAGPRGPRGQTGAGIKGEKGEFGPPGHPGLVGLTGAGIQGEKG
VEGPRGPPGGRGPQGEGLPGPKGDQGFPGELGATGERGVGEPGPKGELGTSGLAGLPGLP
GEDGAPGQKGEAGVAGIRGPDGAAGIGTQGEKGDQGQRGIRGLHGPPGMTGPSGAKGEPG
TPGRLGMPGLPGRAIAGPKGDLGPPGPSGPTGETGYGLPGPKGDRGNPGPSGPFGSKGEG
FPGPVGPPGLPGLQGEQGPEGIGIPGPKGDIGFRGLPGLPGPKGKGVQGPPGNIGRKGPP
GPNGPPGEGLHGPKGEQGSQGVTGPRGPIGEGFPGGKGDRGLQGERGNKGVKGGMGDSGV
PGESGRPGVKGEVGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIK
DFVTALVDRTTVGRNATRIGLVLYSLDVHLEFNLARYMTKQDVKQAIRKMSYVGEGTYTS
TAIRKATQEAFYSARTGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNT
SDTTQAEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSQFCEDENGALVLNRNTNG
FGRNGNNGYGNNGYGNNGYGNNGYGNNGYGNNGNGNYGQGNSGHENNGHENNGHGNSGQG
NSGEGNSGQGNSGQGNSGQGNSGQGNSGHENNGHGNNKHGNTYNEDPILNPSGRTSSQSH
IRGRGDNFDLPLNAGPLPVQVDDEEGEDLDVRTHVRGGSTVAVANETVSIFPAKESSHSN
TAVSLSGSASSSSGTTGSSSSSEGQFQPVSITIPNSISPQESVSLNPRCNLSLDQGTCRE
YNIQWYYDKQANSCAQFWYGSCEGNANRFETEDVCKKTCVLSRTAG
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgttgttccctgctgtgacctggttcctgttggtagcagggctgttgggtgtctgggct
caggactactatgaagagagaacagtgaacaagagacccaggggcaggggggcccaactg
caagctccagccattgcaactaacgtgcaaaaacataatggacaagccattttagatgag
gactgcggtctggagcttgcctttctgctggacagctctgagagtgccaaggagaaccat
gagcaggagaagcgcttttccatggatgtggtggacaggctccaggccacccgtctgcag
acgggccgcagtctgagctggaaggcggccctgctgcagtacagcagtcacgtcatcatc
gagcagaccttcaagcagtggaggggcaccgacaacttcaagtcccacatcacccccatt
gtctacatcggccaaggcacctacaccacctacgccatcaccaacatgaccaagatgtac
ctggaggagtccagcccaggcaacatcaaggtggccatgctgctcactgacggcatctcc
caccccaggaacccagacatcttctcagctgccgctgacgccaagaaccagggggtgaag
ttcttcacggtgggcatcacccgtgcagccaacgagtcagccaacgtggcccagctgagt
ttgttggccagttctcctgcctcccgatacctccataacctgcaggatattgacattgtg
gagaaagtcctcaaagaaattactgacctggcggatgaagggtgtcccccggcccaacaa
tgtgcctgtgagaagggcgaaagaggactcagtggcttagccgggaagaagggtcgccct
ggagatgatggagcccctggtctcaaaggattgaagggagagggaggactaagtggactt
ccaggtcaggatggcggagaaggaaaatctggttacaaaggagagaggggtgagagaggc
gagtgtggcactccaggaattaaaggggacaggggtcctgagggcccaatgggcaccaga
ggagtcagaggtctccagggtttacccggtccacagggtgacgttggacctgagggccct
cagggtaagaagggtgatcggggtcaagctggcccggccggaattcagggagaaaatggt
attggacttcctggaccaaagggtgatctgggattccagggaaaacccggcccccctggt
ccgacagggttgagtgaatatggccagccagggcctcaagggccacaaggttttcaaggg
gagaaaggaccccacggagaggggctccctgggccaaagggagaacgggggctggccgga
ccgagggggccaagaggacagacgggtgcaggaatcaaaggagaaaagggtgagttcggg
cctccaggtcatccaggacttgttggacttacaggagcgggcatccagggggagaaggga
gtggagggtcccagaggtccacctggaggcagaggacctcaaggagagggcttacctgga
cctaagggtgatcaaggtttcccaggagagctcggagctacaggggagagaggcgttggt
gagccagggccaaagggtgagcttggtacatctggcctggctggcttacctggtcttcca
ggcgaggacggggctccaggacagaagggtgaggcgggtgtagctggtataagaggtcct
gatggagcagcagggatcggcacccagggcgagaagggagaccagggtcaaaggggcatc
cgtggattacatggacctcctggcatgaccggaccctcaggggcaaagggggagcctggc
acaccaggccgactgggcatgccaggactaccgggacgggccattgcaggtcccaagggt
gatctaggcccacctggtccctctgggccgactggagagacaggctatgggctacctggg
ccaaagggtgaccgtggtaatcctggtccatcaggaccttttggatccaaaggtgaaggt
ttccctggtccagtgggtcctccaggccttccaggtctacagggagagcagggccctgag
ggcattggcatcccaggacctaagggagacattggcttcagaggattgccaggtttgcca
ggcccaaaaggaaagggtgtgcaaggaccaccgggtaacattggaaggaaaggaccccct
ggtccaaatgggcccccaggggaaggtctgcacggccccaagggtgagcaggggtctcag
ggtgtgacagggccaaggggacccataggggaaggattcccaggaggtaagggtgaccgt
ggcttgcagggtgagagaggaaataagggtgtaaaggggggcatgggagattctggggtt
cctggagagtctgggaggccaggagtaaagggtgaagtggggcttacaagagaagacatc
attaaattgatcaaggaaatatgtggatgtggaatcaagtgcaaagagaggccaatggag
cttgtattcgtcattgacagctcagagagtgttggtccggaaaactttgaaatcatcaag
gacttcgtcacagcgctggtggaccgtaccactgttggacgtaacgccaccagaattgga
ttagtcctgtacagtctggatgtccacctggagttcaatctggcgcgctacatgaccaaa
caagatgtcaagcaggccatcaggaagatgtcctacgtgggtgagggaacctatactagc
accgccatccggaaggctacccaggaggccttctacagtgcccgtactggggttaggaaa
gtggccattgttatcacagatggacagacagacaaacgagagcctgtgaagctggacatt
gctgtgagggaggcccatgctgccaacattgagatgtatgccctggggattgtcaacacc
tcagatacaacccaggccgagttcctgcgtgaactaaatctgatcgcctctgaccctgac
agtgaacatatgtacctcatcgacgatttcaacactctaccagctctggagtcaaagctt
gttagccagttctgtgaggatgagaatggagcccttgtgttgaatcgcaacactaatggc
tttggaagaaatgggaacaacggctatgggaacaatggctatgggaacaacggctatggg
aacaacggctatgggaacaacggctatgggaacaacggaaatgggaactacggacagggg
aatagcggacatgagaataacggacatgagaataacggacatgggaatagcggacagggg
aatagcggagaggggaatagcggacaggggaatagcggacaggggaatagcggacagggg
aatagcggacaggggaatagcggacatgagaataacggacatgggaataacaaacatgga
aacacctataatgaggatcctatcctaaatccaagtggacgcaccagttcccagagtcac
atcagaggccgtggagataactttgatctgcccctcaatgctggaccactcccagtgcag
gtggatgatgaagagggtgaagatttagacgtaaggacccacgtgcgaggaggtagtact
gtggctgtagctaacgaaacagtatccatcttccctgcaaaggaaagctcccactccaac
acagctgtctcgttatcaggatcagcatcatcatcctcaggaacaacaggttcatcatca
tccagcgagggacaatttcagcctgtatcaattactatccctaattctatttccccccaa
gagtctgtctcgctcaatccccgctgtaacctgagtttggaccaaggcacctgtcgagag
tataacatccagtggtattacgacaaacaggccaattcctgtgcacagttctggtatgga
agctgtgaaggaaatgccaaccgctttgagacagaggatgtgtgtaagaagacctgtgtt
ctatctagaacagctggttaa
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