Oncorhynchus kisutch (coho salmon): 109871187
Help
Entry
109871187 CDS
T09179
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109871187 (aff3)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109871187 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
109871187
NCBI-ProteinID:
XP_031661297
Ensembl:
ENSOKIG00005020512
LinkDB
All DBs
Position
LG26:complement(21101630..21136008)
Genome browser
AA seq
1240 aa
AA seq
DB search
MPTVLRDKGKLSNVSLLLRCAFQDMNHSWQSQQPSGGGQAECFLYNPKDTKQHTTQHKQC
MYSQSKLGGMTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWVVNNSLSEQHTHTHG
GRVRHSSSDSSGSDSYSELEEESSGQRSLSPSPETHSEPGTPTDTQALGCTKEIYHPSTT
QWQLDKWLKKVPQKSSSCDQDPSNHDHAQRATEHQSLSPDPHRAPSPSRPWGIREDYSPS
QSPVPSPRFNYSPRHSPRPSPGYSPCPSPSPCSSPCPSPTPRHSPIPSPVLSVCPSPFPS
PRATCSLSSIPQHPPRSPSPSLTHSSPRRYPQVRSPHQESHRPPTWPSLTTSPSHRPKIR
PWTAPVPSTEPKSKPRHSPYPPPQHSSRPKSTQTQPVPTPKTTAKAAPALTTELSHRHKH
RPRPSPNSSPKLHSQPCLKHAHTLDPKSQHLSTSGLRPKESSRHSHNYNSNPRPSNGPSL
TTRPSLSPTPRAKTLPTTDPSRETSSRVGHCSKSSPKPHSLPNSKASSEPRAKFSPSPRP
KVKSWAPAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTEGKGEHEVERQTEKQG
ERQGKKQKERKWERQGERRLAEEQLLRRPWVQSSEEEEDVEERKREEREKEKCKRRWKEQ
QQQSGEWQAVQPKQRPHTNSERHHHPIDPQRHGTKKKRRRKSEEEEERQSQPDPSPPPSP
SSPTPVVPPTDSSASSESDSEPDLPPNVTKVPADSTSSQRPIPRRGYQGPGRPADSRPRV
LYPRLTTAYNPGQGHQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLLNRVPDT
TTGTPASHKHSSSSASSKQKEAMRHLCIPETDRGDSKRKRKSENGIQHHRESKRSNSQTN
GPSAHTESTTHRRLDPHSDTRHNGFLEDYLDSTPLSDTLSPTKPPIKTQNPEPKMEVECC
VGVSGQSQPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADAMVDKLGK
AVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPGARQEDQQL
AVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGKGTGGPPSS
LSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADSLARDNK
EFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcgacaagggcaaactttccaacgtctctttgttgcttcgatgt
gctttccaggacatgaaccactcctggcagtcccagcaaccctcaggaggtggccaggcc
gagtgcttcctctacaaccctaaagacacaaagcagcacactactcagcacaaacaatgt
atgtattcacagtctaagctcggggggatgacccaccctcacctggcgcctcacaaatcc
atgctcgctgatgacttgaagctcagcagtgacgatgatgatgctgataagggccctgaa
cagtcagccccctgggttgttaacaacagtctgtcggagcagcacacacacacacatggt
gggagggtgagacattccagctcagactcttcaggctcagactcctacagtgaattggag
gaggagagcagtggccagcgctcccttagtccaagcccagaaacacactccgaacctggg
acacccaccgacactcaggcccttggctgcaccaaggagatatatcacccctccaccact
cagtggcagctggataagtggctgaaaaaagtcccccaaaaatcctcttcctgcgaccag
gatcccagcaatcacgaccacgcccagagagctacagagcaccagtcgctctccccagac
ccccacagagctccatctccatccagaccctgggggatcagagaggactacagccctagc
cagagccctgttcccagcccgcgctttaactacagccccaggcatagccctcggcctagc
cctggctacagcccctgccccagccccagcccctgttccagtccttgtcctagccccacc
ccaagacacagccccatccctagcccggtcctcagtgtctgtccaagccccttcccaagc
cccagagccacctgcagccttagttccattccccagcacccccctaggagtcctagtcct
agccttactcattctagcccccgccgctatcctcaggttcggagtcctcatcaggaaagc
cacaggcctcccacgtggcctagcctaacaaccagcccgagccatagacccaaaatcagg
ccctggactgcccctgtacccagcactgagcccaagagcaagccaagacacagtccatat
cctccgcctcagcacagctccaggcctaaatccacacagacccagcctgttcccactccc
aagaccacagccaaggcagcccctgcactgaccactgagctgagccacaggcacaaacac
agacccaggcctagtcctaactcgagtcccaagcttcattctcagccttgcttgaaacac
gcacacactctagaccccaaaagccaacacctatcaacctctggactaaggcctaaggag
agtagcagacacagccataattacaactccaaccccagacccagtaatgggcctagtttg
acaaccagacccagtctcagccccacacccagggccaagaccttacccaccacagaccct
agcagagagaccagcagcagagttggtcactgttctaaatccagcccaaagccacattct
ctgcctaactccaaagctagttctgagcctcgcgctaaattcagccccagccctagaccc
aaagtcaagtcctgggcccctgctccccactcaaagcttccacagaggaagccccaatcc
agggagagagaacaggaggtggacaaccggagagagacccatgcaccaaagaggaaggta
gacaggcagacagagggaaagggggaacatgaggtagagagacagacagaaaaacaagga
gagaggcaggggaagaaacagaaggaaagaaagtgggagagacagggagagagaagactg
gcggaggagcagttgcttagacggccctgggtccagagctcagaggaggaagaggacgta
gaggagagaaagagggaggagagagagaaggagaagtgcaagaggaggtggaaggagcag
cagcagcagagtggtgaatggcaggcggtccagcccaagcagagacctcacaccaacagc
gagcgccaccaccatcccatcgacccacaacgccacgggaccaagaaaaagaggaggaga
aagagtgaggaggaggaagagagacagtctcagccggacccttcccctccaccatcaccc
tcctcccccactcctgttgtcccaccaacggactcctccgcctcttcagagtccgactcg
gagcccgatctgcctcccaacgtcaccaaagtcccggccgactccacatcaagccagcgt
cccatccccaggagagggtaccagggcccggggaggcccgcggatagcaggcccagagtg
ctctatcccaggctcaccaccgcatacaacccaggccaggggcaccaaatccagggaaag
cagaaactctacaccctggtcccgtttggacgtcgtgagctggccgcagcctcccatcga
ggcctgagaaacttggtggtgcagatagacctctccctgctcaacagagtgcctgatact
acgacaggcaccccagcctctcacaaacactcttcctcctctgcctcttccaagcagaaa
gaagccatgagacacctgtgcatccccgagacagacagaggagacagcaagaggaaacgc
aagtcagagaatggaatccagcaccacagagagagtaagaggagcaactcccagaccaac
ggcccctctgcccacacagagtctacaacgcacagacgtctagaccctcactcagacacc
agacacaacgggttcttggaggactatctggacagtacccctctctctgacaccctcagc
cccaccaagccccccatcaaaacacagaacccagagcctaagatggaggttgagtgttgt
gttggggtgtcagggcagtctcagcccgagtgtgaaccatggggacctcctttacaacgg
gcagggggacagagaggaaccgtaaccaaccatgaacccccacatcatgctgagtactac
atgcatgaagccaagaggatgaagcaccgtgcagatgccatggtggataagctggggaag
gcagtgaactatgtggatgctgctctctccttcatggagtgtggaaaagctatggaggaa
ggaccactggaggccaagtctccctataccatgtacgcagagacagtagagcttatcagg
tacgccatgaagctgaagaaccactctggcccaggggctagacaggaagaccaacagttg
gccgtactgtgtttccggtgccttgctctcctatactggcagatgtttcgtctaaagaag
gatcacgccctgaagtattccaaggctctattggactactttaagagttctccaaaagtg
cctactactcccccaatctggagcgactcgggaaagggcacagggggacctccctcgtcc
ctctcccccagcccctcagccctcaccctgggctctcacactggcagctccccctcctcc
ctcatcagcattccccaacgtatccaccagatggcagcaaaccacctcaacatcaccaac
agtgtcctctacagctatgagtactgggaggtagcagatagccttgccagagacaacaag
gagttttttaactacttgaacaccctgtcggggccgttgactctccacagtagtattgct
catgcagtccagtacaccagacaggctctacagtggatacgcatcagtgccaatgtgggt
tag
DBGET
integrated database retrieval system
