Oncorhynchus kisutch (coho salmon): 109871194
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Entry
109871194 CDS
T09179
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109871194
Glycosaminoglycan binding proteins [BR:
oki00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
109871194
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
109871194
NCBI-ProteinID:
XP_031662107
Ensembl:
ENSOKIG00005028973
LinkDB
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Position
LG26:complement(22730793..22769641)
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AA seq
1180 aa
AA seq
DB search
MSDSLLKCILCTLPFILAFTLLGIRTDAASGEGPILPDGQDLYFKTVGISPILSVPQSIV
HSPVLKVSNKDHGATHRQKRNVLFPSGVKLCGQESVQQAIANHLSYFHLRVCQETVWEAF
KIFWDRLPNQEEYQTWMRRCLDGKTTALEMGNNFSQSEEHLALVESRMSVTGLKSDATNS
WLHMCSTQTPDTEQEAQEVVGEVIIEEPEAAEAGPSKEPTNDIEMEVLARVHLEQVVELS
ILLKGETYSDALRDPASLQYQTLNQQFTDKIKDAVGGLPGFKSVAVLQFRLQKDAQGLDG
VVVVYAVTVEVEGEGVSSDQLDYLTLQSNLVENSYREVKERNYITEAQHKDNIISDTLVL
DPDSLQLYTVSSVTESFDPTPGIPGDYTNGSVEDILAVEMTPTEVEAQDVATGENDVIVV
EESMTLPAEVTIDDTSIEEEVLLLGNTVSTESPLLEDLPTDPTSPEQPKGATLPEPPLEI
EASGSGVKVLKDLHFQPEEEEAIEEEPAPEEELTIEEEPAPEEELTIEEEPAPEEVIIEE
DIQTEEAEAVVSEEDKVEEETVEVPDTVEVLEEEAGPSEDLEYSIIETETIEEVEEEAPA
FVPVEMMEAPEPVGGLGVPENPLAIATLPPDEPEEETNVVLAYPEYGEEIESLEGPIIEK
PLTKVDAVEVEEEVAEEVVVEVPDISEISEEDLEEDEILLVDEAAPDATHTTPLSAEKES
PFTRVSDFIVLEEVTEATALDTAPEPEAEQEDQGVTPALIPAEYHPDPDISITLELQTID
PVTDYDLVHFGGTNQTEEGSSGYPSGVVNGTDHSIAMPINPGRALMVFFRLRVTNMMFSD
DLFNKSSAEYKALEQRFLELLVPYLQSNLTNFQNLEILNFRNGSIVVNSRMKFGRPMPRG
VNNAVYLILEDFANTAYQTMNLAIDKYSLDVESGDQANPCKFQACNEFAQCSVNRWSSEA
ECVCNAGYFSVEGLPCQSICELQTDFCMNDGKCDIIPGQGAICRCRVGENWWYRGEHCEE
YVSEPLVVGIAIASVAGFLLVASGVIFFLARTLRDQYDKDEAEDPIRRGESIPSLERATK
YNPMYESEATTGYSHYYRRYPEAPVYSSASAEASTDFSSEEIRHIYENSELTKEEIQDRI
RIIELYAKDRQFADFVRQHQTALDTRRQSTLDKRRESTST
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctttattgaaatgtattttgtgtacacttccgttcattttagcgttcaca
cttttgggaataagaacagatgctgcatctggagaaggacctattcttcctgatggacag
gatctttatttcaaaacagttggcatttcacccattctatcagttcctcaaagcatagtt
cattcacctgtcctcaaggtttcaaacaaggaccatggagctacccaccggcagaagcgc
aatgtccttttccccagcggggtcaaactctgcgggcaggagagtgtgcaacaagccatc
gcaaatcatctcagctactttcaccttcgagtgtgtcaggagacggtgtgggaagccttc
aagattttctgggaccgcctcccgaaccaggaggagtaccagacctggatgaggcggtgc
ctggacggcaagaccaccgctctggagatgggcaacaacttcagccaatcagaggagcac
ctggctctggttgagagtagaatgtcagtgacggggttaaaaagtgatgccaccaactca
tggttacatatgtgcagcacccagactccagacacagaacaggaggctcaagaggttgtc
ggcgaggtcatcatagaggagccagaggctgcggaggcggggccttccaaagaacccaca
aatgacatagagatggaggtgttggcgcgggtccacctggagcaggtggtggagctgagt
atcttgttgaagggagagacgtacagcgatgctctcagagaccctgccagcctccagtac
cagacactcaaccagcagttcactgacaagataaaggatgctgtgggggggctgccaggc
tttaagagtgtggctgtgctgcagttcaggcttcagaaggacgcccaagggttggatggt
gtggtggtggtctatgcagtgacagtggaggtggaaggggagggggtgagcagtgaccag
ctggactacctgaccctgcagtccaatctggtggagaactcctacagagaggtgaaggag
aggaactacatcactgaggcccagcacaaggacaacattatcagtgatactctggtcctc
gaccctgactcactgcaactatatactgtgtccagtgttactgagtcatttgatcccacc
cctggaatacccggggattacaccaacggcagtgtggaggacattttggctgttgagatg
actccaaccgaggttgaagcacaggatgtagcgacgggggagaatgatgtcattgttgta
gaggagagcatgaccctccccgctgaggtgaccatcgatgacacaagcatcgaggaggag
gttctgctgttggggaacaccgtgtctacagagagccctttgttggaggacctccctaca
gaccctacctcccctgagcagccaaagggtgctacgctccccgagcctcctctggagatt
gaggcctctggttcaggtgttaaagtactgaaggacttgcacttccagcctgaggaagaa
gaagccatagaagaagagccagctccagaagaggaactgaccatagaagaagagccagct
ccagaagaggaactgaccatagaagaagagccagctccagaagaggtaatcatcgaggaa
gatatccaaacagaagaagcagaagcggtagtctccgaggaagataaggtagaggaggaa
acagtggaggtccctgacacagtagaggttctagaagaggaagctggaccctctgaagac
ctagagtactccatcatagagacggagaccattgaagaggtagaggaagaggcccctgcc
ttcgtccctgtggaaatgatggaagctcccgagccagtggggggcctcggtgtccccgag
aatccccttgccattgcgactctgcccccagatgaacctgaagaggagactaacgtggtg
ctggcttatcctgaatatggagaggaaattgagagcttagagggaccaatcatcgagaag
ccattaactaaagtggatgctgtggaagtggaggaagaggtggcagaagaagtggtcgtt
gaagttccggacatttctgagatctcggaggaggacttggaagaagacgagatcttattg
gtcgatgaggctgctccggacgccacccacaccacccctctctctgcggagaaagagtca
cccttcacccgagtctctgatttcatagtattggaggaggttacagaggccacagccctg
gacacagccccagaaccagaggcagaacaggaggaccaaggggtcaccccagctctcata
cccgccgagtaccaccctgatcccgacatttctatcactctggagctgcagacgatagac
cctgtgacagactatgacctggtccacttcggcgggacaaaccaaacagaggaagggagc
agtgggtacccttctggagtggtaaatggtacagaccacagcattgccatgccaatcaac
ccagggcgggctctgatggtgttctttagactgagggtcaccaacatgatgttctcagat
gacctcttcaataagagctctgcagaatataaggccttagaacaaaggttcctcgagctg
ctggtcccctacctccagtccaaccttactaacttccagaatctggagatcctgaacttc
cggaatgggagtatcgtggtcaacagtcggatgaagttcgggaggccgatgcctcgcggc
gtcaacaatgcagtctacttgatcctggaagacttcgctaacacagcctaccaaactatg
aacctggccatcgacaagtactcactggatgtagagtcaggtgaccaggccaacccctgt
aagttccaggcgtgtaatgagtttgcccagtgctctgtgaaccgctggtctagcgaggca
gagtgtgtgtgtaatgctggctacttcagcgtggaaggtctgccctgtcagagcatctgt
gaactgcagacagacttctgtatgaacgacgggaagtgtgacatcatacctggacagggg
gccatctgcagatgtcgtgtaggggagaactggtggtaccgtggagaacactgtgaggag
tatgtgtcagaacctctggtggtcggcatagcgatagcctctgtagcaggtttcctattg
gtggcatctggtgtgatcttcttcctggcgaggacactacgggatcagtacgataaggat
gaggccgaggaccctatacggcgaggggagagtatcccgtctctagagagggccactaag
tacaaccccatgtatgagagtgaggccacgacaggctacagccactactaccgccgctac
ccagaagccccggtctacagcagcgccagcgccgaggcctccacagacttcagcagtgag
gagatacgccacatctacgagaacagcgaactgaccaaggaggaaatccaggacaggata
cgcatcattgaactctatgcgaaggaccggcagtttgcagactttgtgcggcagcatcaa
actgccttggatacacgcagacagagcacccttgataaacgcagagagagcacgtccacg
tag
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