Oncorhynchus kisutch (coho salmon): 109871210
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Entry
109871210 CDS
T09179
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109871210
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109871210
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
109871210
NCBI-ProteinID:
XP_031661254
Ensembl:
ENSOKIG00005015546
UniProt:
A0A8C7G3C5
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Position
LG26:26083979..26108857
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AA seq
877 aa
AA seq
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MGLKDHLEDGTGHNLNLGLDLDYLHVEGTDRQASLNATAGTHSGVLEGEEAPVGGTHSSV
SSSSISSSSSSNSSEESAASDSEDERGIHHGTGSGAETPHPHPCHPAGLGLPQSPPPRDP
KLPTDLLTEYRSKMEFALKLGYSEELVLLVLRKLGPDALINDILGELVKLGTRTETEEAG
ESAASQSSYSSLSSPSLDSSRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCHG
IQLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFTPSRRVQGR
RVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKTEWKKFIDERLLMYSFVNDKFMPPDD
PLGRHGPSLENFLRKRPVIPEHRKQPCPYGKKCTYGHKCKFYHPERGSQPQRSVADELRA
SAKNSSSSSTSSSKSLGSAPLVKSHSMSSSSSADGLPEPHRAAPKRRSDPGLCTPPYNDL
LEERLGGRIKSEARRGSSSSSSSSCSNSLLVPASGGPPSSQGFSLQDWRDHNAGRNGSCR
APGLLELGHSESYPTCESPKLGYNSLMRAYSSLNLVVPLIPERLFPTDLRTGLLASDCSS
EGSMSSDSFSPDPLLEDGLKCHHPHHHHCSSRYPHHTNHLPAGLTLHPHGGSHHSYPLSQ
SMGRPQVFSLEDHPSSLHHYLPPHLQHPSVGSSSGCSEDYPPQPPPQTSSPHCHSHSSTQ
GHNLGGSTWQDNNSLQNSRLYEHSPVRPRRTYPGMGQEQRLASWDSHYQQLLQPCYEAFN
FQSQPEGHEQPWHSSWPRGTHSPHPQPPSSSHPPPHPSMDPLHQGGRCQDVRDKVFVNLC
NIFPPELVKVVMERNPNVMDAQQLAAAILAEKSQARY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaacaggccacaacctcaatctggggctggat
ttggactacctccatgtggaaggcaccgaccgccaggccagcttgaatgccacagccggc
actcactcaggagttttggagggggaagaggcaccggtgggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtagtagtaactcctctgaagaaagtgctgcgtcg
gacagcgaagatgagcgggggatccaccatggcactggttctggcgctgagaccccccat
ccgcacccctgtcaccctgctggactgggcctgccacaaagccccccccctagggacccc
aaactccccaccgacctcctcacagagtatcgctccaagatggaatttgccctgaagctg
ggctactctgaggagctggttttgctggtgctgaggaagctagggcctgacgccctcatc
aacgacatactgggagaactggtcaaactaggcaccaggacagagacggaggaggcaggg
gagtctgccgcctcccagtcgtcctactcctccttatcctccccctctctggactcctcc
agactggactgctcctcccagcttctgttggatgacaaggagaacatcaggcctgtggtg
gtggatgggagtaacgtagccatgagtcatgggaataaggaagtgttctcctgtcatggc
atccagctggctgttgattggttcttggagcgtggtcaccgtgacatcactgtgtttgtg
cccgcctggagaaaggaacagtccagaccggatgccctcatcacagaccaggagatattg
cggcgtctggagaaagacaagatcctggtgttcactccgtctcgtcgggtccagggccgc
cgggtggtctgctacgatgaccgcttcatcgtcaagctggcctacgagtccgacggcatc
atcgtctctaacgacaactaccgggacctggccaatgagaagacagagtggaagaagttc
attgacgagcggctgctcatgtactcattcgtcaatgacaagttcatgcctcctgatgat
cctctgggtcgccatggtcccagtttggagaacttcctgaggaagagaccagtgatccca
gaacacaggaagcagccctgcccctatgggaagaagtgcacttacggccacaagtgtaaa
ttctaccaccctgagagaggcagtcagccccagcgctctgtggccgacgagctgcgtgcc
agtgccaagaactcctcttcctcctccacttcttcctccaagagcctgggctctgctccg
ctggtgaagagccacagcatgtccagcagctccagtgcagacgggctcccagaaccccac
cgagccgccccaaagaggcggtcggaccccggcctgtgcacccccccctacaacgacctc
ctggaggagcggctgggcgggaggatcaaatcagaggcccgcagaggtagtagcagcagc
agtagcagcagctgtagcaacagcctcctggttcctgcctctgggggtcctccttccagc
caaggcttctctctgcaggattggagggaccacaacgcagggaggaacggctcctgcaga
gctccagggctgttggagcttggtcactctgagtcatatcccacctgtgagtccccaaag
ctgggctacaactccctaatgagggcgtactccagcctaaacctggtggtgccactgata
cccgagcggctgttcccaactgacctacggacaggcttgctggcatctgactgcagcagc
gagggcagcatgagctctgactccttctcccctgatcccctattggaggatggcctcaaa
tgccaccacccccatcaccaccactgctccagccgctacccacaccacaccaaccacctg
cccgctggtctgaccctgcacccacatggaggctcccaccatagctaccccctatctcag
agcatggggaggccacaggttttcagcttggaggatcatccctcctcccttcaccactac
cttcctccccatcttcagcacccatctgtggggagcagctctggctgttcggaggactac
cctccccaacctccaccccagacctccagcccccactgccactctcacagctcaactcag
gggcataacctggggggctccacctggcaggacaacaacagcctccagaactcccggctt
tacgagcactcccctgtccgcccacggaggacctaccctgggatgggacaggagcagcgg
ctggccagctgggactcccattaccagcagctcctccagccctgctacgaggccttcaac
ttccagtcccagcctgagggccacgaacaaccctggcactcttcctggcccagggggaca
cactcgccccatcctcaacccccttcctcctcccatcctccaccccacccctccatggac
cccctgcaccaggggggaagatgccaggatgtgagggataaagtgtttgtcaatctatgt
aacatctttcctccagagctggtgaaggtagtgatggagaggaaccccaacgtgatggac
gcccagcagctggctgcagccatcctggctgagaagtcccaggctcgctactga
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