KEGG   Oncorhynchus kisutch (coho salmon): 109871245
Entry
109871245         CDS       T09179                                 
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagosome
oki04148  Efferocytosis
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109871245
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109871245
   04148 Efferocytosis
    109871245
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109871245
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109871245
   04810 Regulation of actin cytoskeleton
    109871245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109871245
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109871245
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    109871245
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin beta subunits
   109871245
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 109871245
NCBI-ProteinID: XP_020317644
Ensembl: ENSOKIG00005012644
UniProt: A0A8C7FPK9
LinkDB
Position
LG26:complement(37219955..37307778)
AA seq 804 aa
MWNPWKLLYRTALGCMILEIFIHNVAQGLNVCMSGSALSCEECLIIHPSCAWCAQEKFGS
ARTLMSRCDLRQNLQKRGCEAHHMESPSSSTTVVKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTARKYQDNPCNGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTNMDYPSLALLGEKLAANNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNSIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFDVSIDARGCPAPGTQQSFTIKPVGFKDRLEVSVDYRCACGCTDQTQANSTH
CSSIGQYTCGICRCDPGYLGARCECQEGEAGSMYLSACRQAEGMQICGGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGQICSGRGSCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSSGRLSDN
QTCQRLCKDEIITVETLKTDDPNAVLCLYKTENECVMKFTYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMASNPLYK
QPISNDYVETDFSMYSKSYNGAAH
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtggaacccgtggaagttgttgtaccgtacagctcttggctgcatgattctggaaata
tttattcacaatgttgcacaaggtctgaatgtgtgtatgagtggcagcgctctgtcttgt
gaagaatgcctcatcatccatccaagctgtgcctggtgtgcgcaagagaagtttggcagt
gcgaggaccctgatgtcgcggtgtgacctgcgtcagaacctgcagaagaggggctgtgaa
gcccatcatatggagagtcccagtagcagcaccacggtagtgaagagcgaacccctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctcagtctccgaccaggtgaccagacatcatttaaagtgcaggtgcgtcaagtggaggac
tacccagtggacctgtactacctgatggacctgtctctgtccatgaaggatgacctggac
accatcaggaacctgggcaccaaactggccgatgagatgaggaaactcaccagcaacttc
agactgggcttcggatcctttgtcgacaagaacatgtcccccttctcctacacggcccgc
aagtaccaggacaacccctgcaatggatacaaactgttccccagctgtgtcccctccttc
gggttccgccacctcctctccttgactgacaaagtggatcgcttcaacgaggaagtacag
aaacagatggtgtctcgcaacagggacgctccggagggaggcttcgatgccatcctgcag
gctgccgtctgtaaggagaggataggctggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaagctgggagggctggtccagccc
catgatggggagtgccacatgaatgagaagaatgagtacagtggctccaccaacatggac
tacccctctctggctctactgggagagaagctggctgcaaacaacatctatctcatcttc
gctgtgacaaaaaggctgtatgtcatttacaagaatttcacagcactgatacctggaacc
acagtggagattctggatcaggactccaagaacatcatacaactcatcgttaacgcctac
aatagcatccggtccaaggtggagctgaccgtgtgggatcaacctgaagacctcagtctg
tccttcactgccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgac
ctcaagattggagacacggtgtccttcgacgtgagtatagacgccagaggctgccccgcc
ccaggtacccagcagagtttcaccatcaagcctgtgggcttcaaggatcgtctggaggtg
tctgtggactaccgctgtgcatgtggctgcaccgatcagacccaggctaacagtacccac
tgcagctccattggacagtacacctgtggtatctgccgctgtgacccgggctacctgggt
gcccgctgtgagtgccaggagggtgaggctggcagcatgtacctgagcgcctgcaggcag
gctgaggggatgcagatatgtggtgggagaggggagtgcagctgtaaccagtgcctctgc
tatgagtcagagttcgggaagatctacgggaccttctgcgagtgtgacgacttctcctgc
gctcgacacaagggcatcctctgctcgggtcacggagagtgccactgtggagagtgtaag
tgccatgcgggctatatcggggacaactgtaactgttccactgacacctcatcctgtgtg
tctgatgacgggcagatctgcagcgggcggggcagctgtgcctgtgggcgctgccagtgc
actgaaccaggggccttcggggacacctgcgaaaaatgccccacctgccctgatgcctgt
ggcaccaagagggaatgcatcgaatgccggcttttcagctctggaagactgtccgacaac
cagacctgccagcggctatgcaaggatgagatcatcactgtggaaacgcttaaaacagac
gaccccaacgctgtcctctgcctgtacaagacggagaacgaatgtgtgatgaagttcacg
tactctgaacacgccaacggcatgtcagtcctcacagctctcaaagagccagagtgtggc
gcagcgccggacgccatgacggtcctcctggcggtggtgggcagtatcctactggtgggc
atcgtgctgctagccatctggaagctggtcatcaccgtgcacgaccgcagagagttcgcc
cgcttccaaagtgcacgctcccgcgcacgatatgagatggcatccaaccccctgtacaag
cagcccatctccaacgactatgtagaaaccgatttcagtatgtacagcaagtcttacaac
ggagcagcccactga

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