Oncorhynchus kisutch (coho salmon): 109871322
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Entry
109871322 CDS
T09179
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109871322 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109871322 (gtf2e1)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
109871322 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
109871322 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
109871322
NCBI-ProteinID:
XP_020317751
Ensembl:
ENSOKIG00005014546
LinkDB
All DBs
Position
LG26:14633394..14671637
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AA seq
454 aa
AA seq
DB search
MSEPELLTKVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADMYPQSVEISMGEQEEQQQRRQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNS
GDDAGGAQVGVVGLGGGQSEENEEVMRALLIHEKRSGAGPAGGGAVAAGGGAIAAARGSD
SDSDTSESDEDSPTAPPPVAAAQRRPTGMEMEEEEEDDDEFEEVGADESMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacaaaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttttacggggtggagcatgccctggctctggatgtccttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctgaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcaactgtttgaccccatgacagggacgtttcgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacaaatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagccgggaccgt
gcggcggcggcagcgggtgcagctgccggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacatgtacccccagagcgtggagatcagcatgggagagcaggag
gagcagcagcagcgtcggcaggccagcgaggggaaggcacccagggagagacccgtgtgg
ctgactgagagcactgtgcatggaggaacgtacagcgagccagacccactcaaaaactcc
ggagacgacgcgggaggagcccaggtgggcgtggtcgggctcggcggcggccaatcggaa
gagaacgaggaagtgatgcgcgccctgctcatccatgagaagaggagcggtgccgggccg
gcaggaggcggagccgtagcggcaggaggcggagccatagcggcagccaggggcagcgac
tcggatagcgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtggca
gcggcccagcggcggccgacgggcatggagatggaggaggaggaggaggatgatgacgag
tttgaggaggtgggggccgatgagtccatggtgatggtgggggggcggtcgttctcctat
cgggaggtgagccagaggccagagctggtggagaagatgagctctcaggagaaagaggca
tacatcgagatgggacagaacatcttccaggagatgtacttctga
DBGET
integrated database retrieval system
